Onychostoma macrolepis: 131520260
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Entry
131520260 CDS
T09350
Symbol
tyw1
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omc03016
]
131520260 (tyw1)
Enzymes [BR:
omc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
131520260 (tyw1)
Transfer RNA biogenesis [BR:
omc03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
131520260 (tyw1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
Motif
Other DBs
NCBI-GeneID:
131520260
NCBI-ProteinID:
XP_058600323
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Position
15:complement(12131184..12204909)
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AA seq
750 aa
AA seq
DB search
MLFLAVVSCLLYCTVSAEKPGALNDVWDFTESYLLTVWQNRLYVYTTAAVLIGVWFTVNM
LFKKKKMVDPISPLLYKSVKKQELSTETEKVIHVSGVKVFYGSQTGTAKGFAKELAGDVV
AQGIQCEVIDMKEYDPEDRLAEECTSKMICVFLVATYTDGQPTESAEWFCKWLEEASTDF
RYGKTYLKGMRYAVFGLGNSVYVGHYNTVSKNIDKWLWMLSAARIMTRGEGDCNVVKSRH
GSVQADFQAWKTKFLNRLQALAKGEKKACSGKCKNGSCKNKKKHKEEAEDSQSLAEKNNS
EEELMESSSDAESSAEEEKSHGSVIDMEDLGNVMNRMKKAKRMEGDEEDSQRVKLSKQNG
VRKSESEEERREMITPALRDALTKQGYKLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGI
ESHRCMETTPSLACANKCVFCWRHHTNPVGTEWRWKMDPAEKIIQEAVENHRNMIRQFRG
VPGVRPERFEEGLAVKHCALSLVGEPIMYPEINSFLRLLHQQKISSFLVTNAQFPEEIRS
LVPVTQLYVSVDASTKDSLKKIDRPLFKDFWQRFMDSLRALGEKQQRTVYRLTLVKAWNV
DELKAYADLIALGQPDFIEVKGVTYCGESSASSLTMANVPWHEEVVYFVQQLANLLPDYE
IACEHEHSNCLLLAHHKFKVEGEWWTWIDYKRFQELIQEYEESGGTKIFSAMDYMAKTPS
WAIFGARERGFDPSDTRFQRKNKTKDISGC
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttttagcggtggtatcgtgtttgctgtattgtacggtcagcgctgagaagcca
ggtgctttgaatgatgtttgggatttcactgagagctacctgctgacagtgtggcagaac
aggttatatgtgtacactactgctgctgttctcataggagtctggtttactgtgaacatg
ctttttaaaaagaaaaaaatggtcgaccctataagtcctctgctttataaatctgtgaaa
aagcaagaactttcaactgaaacagaaaaagtcattcatgtttctggggtcaaagtgttt
tatggatcacagacaggaactgcaaagggttttgcaaaagagcttgctggagacgtcgtt
gctcaggggatccagtgtgaggttatagatatgaaagagtacgacccagaggacagactg
gctgaggagtgcacaagcaagatgatctgtgtgttcctggtggccacatacacagacggg
cagcccactgagagcgccgaatggttctgtaaatggcttgaggaagcctccacagacttc
cgatatgggaaaacctacctgaagggaatgagatatgccgtctttgggctggggaactcc
gtttatgttggccattacaacactgtcagtaagaacatagataagtggctgtggatgctg
agcgctgcgcggatcatgaccagaggagaaggcgactgcaatgttgtgaagagccgacac
ggcagcgtgcaggctgacttccaggcctggaaaacgaagttcttgaaccggctgcaggcc
ctggccaagggtgagaagaaagcctgctctggcaagtgcaagaacggcagctgcaagaat
aagaagaaacataaggaggaggcagaggacagccagtcgctcgctgagaagaacaactct
gaggaggagctgatggagtccagcagtgatgcagagtcctccgctgaggaagagaagtct
catggctccgtcatcgacatggaggaccttgggaatgtgatgaatcgtatgaagaaagcc
aagaggatggagggagatgaagaggactcccagagggtgaagctgtcaaagcagaatgga
gtgaggaaaagcgagtcagaggaggagcggagagagatgatcactccagccttgagagat
gctctgactaaacaagggtacaaactaataggaagtcactctggagtaaaactgtgtcgt
tggaccaagtcaatgctgagagggagaggaggctgctataaacacaccttctatgggatt
gaatcacaccgctgtatggagaccacaccgagcctggcctgtgccaacaaatgtgttttc
tgctggagacaccacaccaacccggtgggcaccgagtggcgctggaaaatggacccagct
gagaagatcattcaagaggctgtggagaaccacaggaacatgattcgccagtttagaggt
gttccaggagtgcgtcccgagcgctttgaagagggcctcgctgtgaagcactgtgctctg
tctctggtgggcgaacctatcatgtatcctgagatcaactccttccttcgactccttcac
cagcagaaaatatccagcttcctcgtcacaaacgcccagttccctgaggagatcaggagt
cttgtgcctgttacacaactttacgtcagcgttgatgccagcaccaaggacagtctgaag
aaaattgaccgtcccctcttcaaagacttctggcagcgcttcatggacagtctcagagca
ctgggtgaaaagcaacagcgtacggtgtacagactgaccctggtgaaggcctggaatgtg
gatgagctgaaggcctacgcagatctcatcgcccttggacagccagatttcatcgaggtc
aagggagtgacatactgtggcgagagctcagccagtagcctgacaatggccaacgtaccc
tggcatgaggaggtcgtctacttcgtacagcagcttgccaacctgctcccagactatgaa
attgcctgcgaacacgagcactccaactgtctgttactcgcacaccacaagttcaaagtc
gaaggggagtggtggacgtggattgactacaaacgcttccaggagctcattcaggaatac
gaggagagcgggggcaccaagatcttctcagcgatggactatatggccaagacccccagc
tgggcgatttttggggcccgagagaggggatttgacccctcggacacacgcttccagaga
aagaataagaccaaagatatatcagggtgctaa
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