Onychostoma macrolepis: 131523961
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Entry
131523961 CDS
T09350
Symbol
blm
Name
(RefSeq) recQ-like DNA helicase BLM isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03440
Homologous recombination
omc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131523961 (blm)
03460 Fanconi anemia pathway
131523961 (blm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
omc03032
]
131523961 (blm)
03400 DNA repair and recombination proteins [BR:
omc03400
]
131523961 (blm)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
131523961 (blm)
DNA replication proteins [BR:
omc03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
131523961 (blm)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
131523961 (blm)
Bloom's syndrome complex (BTR)
131523961 (blm)
FA (Fanconi anemia) pathway
131523961 (blm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
BLM_N
BDHCT
RecQ_Zn_bind
Helicase_C
HRDC
RQC
ResIII
Motif
Other DBs
NCBI-GeneID:
131523961
NCBI-ProteinID:
XP_058606608
LinkDB
All DBs
Position
18:15311423..15321683
Genome browser
AA seq
1437 aa
AA seq
DB search
MPSLPQNNLKEQLERHNNAAQNKLSLLKLKPGGFCFKKKSSSGISKDEVPQKVTGANVFA
NRSVNIPRSCEVTKTPVTFSQKPVRAVPKVNFFAAPGRPKTNTVNPLVNPFAVNKTPPVL
SAIKDLPKSAVLPKDQTVVEPKGDISQLSFNEWDDLDDFETPVKARVSSPVTETSTKKLS
VSDQNTSRNSSCAKSDETTLNGGSQVTETITAPKDVLSAANRVSIEPAEREPEDSPIKKS
KRHKKSVQQKALLSDTEDEEIIDCITPEKNEKDIKCVTTAKEEQWAETNIIDIDETETDN
FYEDFIPPSPVPEETSPFGSEKEKSSSDPVTHADKNVPPHESASNLSAPFDEPAKELKGP
DDALFTVMEYICRLVDTIPEHELIALTCGTELLLQRAHRKRILANGAPSRTPQLDPAASP
YSRLLNRQGFGVTPSSLTSSMTPMTSEKGEAAKTGFLFRKSIASIISLENDSVFEDSDCI
INGVETPGGSWNPNSTAKTATSRDISSRSSSPSTKSESKMDKCYSRLSFSESNNQTVGGD
QVDLFYSPKRVDSGKRNAESSVETIMEVPNCSRADTVPPDDFLIDDFDIDDFDETDVPDY
FEEPPSVLASRDSFGAKTPSVQEGGPSKPLERKTVTPPALKNTKTSNPEPVYRNPAHDRF
RGFSFPHSPEMMKIFHKKFGLHQFRFNQLEAINAALLGEDTFILMPTGGGKSLCYQLPAC
VSAGVTIVISPLRSLIVDQVQKLTTLDICATSLSGDKKDSEAAKIYMQLSRKDPPIKLLY
ATPEKVCASGRMISALQNLYERGLLARLVIDEAHCVSQWGHDFRPDFKRLHELRRMFPSV
PIMALTATATPRVQKDILNQLAMTRPQVFTMSFNRHNLKYSVLPKKPKKVDEECIQWIKK
YYPRDSGIVYCLSRNDCDTLAVSLQRAGIAALAYHAGLSDSDREYVQNKWINQDGCQVMC
ATIAFGMGIDKPDVRYVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYSYSDVIRIKRL
IAMDKDGNQQSKATHINNLHSMVHFCENVAECRRIQLLAYFGEHTFNTSFCKEHPEVICD
NCARPHKYKSRNVTDDVKKIVRFVQENCEKVGNRYGKSAQQNRLTLNMLVDIFLGSKSAR
IQSGMFREGAAYSKHNAERLFKKLVLDSVLMEDLYITNNMQAVAYISAGPKAMSVLSGCM
QVEFIETESASSIRKHKASVIENVSKREEMVKKCLQELNDLCKKLGKVFGIHYYNIFSTA
TLKKIAETLSSDPEVLLQIDGVTEDKLEKYGAEVIELLQKYSEWQLPAEAQTESSGWIDT
TRGHQNEEDDDDEGDTTSTYFRSTSGRGAKRKQGSYSRKPKRRKGASGQNSSSKGGCSNN
WSSSRGGRGGYRGGNRSAGRGSRPAPSVPAVKRPGFMALPTPQTAARPFLKPIFSHL
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atgccgagtcttcctcaaaacaacctaaaggagcaactggaacgacacaacaatgcggca
cagaacaagttgtcactgctgaaactaaagcccgggggattttgtttcaaaaagaagtct
tcatcaggtatctctaaagacgaagttcctcaaaaggtaactggtgcaaatgtcttcgca
aacaggagtgtcaatattccccgcagctgtgaagtaaccaaaactcctgtgacgttttcg
caaaagcctgtgagagcagttccgaaagtcaacttcttcgctgcacccggcagaccgaag
acaaatactgttaatccattagtcaacccatttgctgtgaacaaaacgcctcctgtccta
tctgccattaaggatttgccaaaatctgcagtcttacctaaggatcaaactgtggttgaa
cctaagggtgacatctcccaactctccttcaacgaatgggatgacttggatgattttgaa
accccggtcaaggcaagagtatcatccccagttacagagacctctacaaaaaagctaagt
gtatcggaccagaacacgtcccgaaattcctcttgtgctaagagtgatgagactacatta
aacggaggttcacaagttacagaaaccataactgccccaaaggacgtcctgtcagctgct
aatagagtcagcatagagcctgctgagagagagccagaggactcgccaattaaaaaatcc
aaaagacataagaaatcagtccagcaaaaggcgttactgagtgacactgaagatgaggag
atcattgattgtattaccccagagaaaaatgaaaaggacatcaagtgtgtgacaactgct
aaagaagagcagtgggctgagacaaacatcatagacattgatgagactgagacagacaac
ttttatgaggatttcatccctccatcccctgttcctgaggagacgagtccctttggctca
gaaaaggagaaaagttcatctgaccctgttacacatgctgacaaaaatgttccacctcat
gagtctgcctcaaatctgtcagcaccctttgatgaacctgctaaagaattaaaaggacct
gatgatgctctctttacagttatggagtatatttgtcgtttagtggacactattccagag
catgagctcatagcactgacctgcggcacagagctattactgcagagagcacacaggaaa
aggattcttgctaatggtgcaccatctagaacacctcagttagatccagcagcatctcca
tattctagactgctaaacagacaagggtttggagtcacaccctctagtctaacatcatct
atgaccccaatgacatcagaaaagggagaggctgccaaaacaggctttctgtttcgcaag
tccattgcctccatcatatctttggaaaatgacagtgtgtttgaggattctgactgcatc
atcaatggggttgagacccctggtggatcctggaatcctaacagcaccgcaaaaacagca
actagtagggacatctcaagcaggtcaagttccccttcaaccaaatctgagtcaaaaatg
gataagtgctactcaaggttgtctttcagtgagtcaaacaatcagactgtgggtggagat
caggttgacttgttttattcccccaaaagagtagattcaggaaagagaaatgctgagagc
agtgttgaaaccatcatggaagtacccaactgttctcgagcagatacagtgccacctgat
gacttcctaattgatgactttgatattgatgattttgatgagactgatgttccagattat
tttgaagaacctccaagtgttttggcatcaagagacagctttggtgcaaaaacgccatcg
gtgcaggagggagggccttcaaaacctttggagagaaagactgtaacaccgccagcactg
aaaaataccaaaacatccaaccctgaacctgtgtacagaaacccagctcatgaccgcttt
agaggcttcagctttcctcacagcccagagatgatgaagatcttccataagaagtttggg
ctgcatcagttccgcttcaatcagctggaggctattaatgccgcactgttaggagaagac
acgtttatactgatgcctacaggtggtggtaaaagtctctgctatcagcttcctgcttgt
gtctctgctggagtgactattgtcatttctcctctacggtcactcatagttgaccaggtc
caaaagcttaccacattagatatctgtgcaactagtttatctggggacaaaaaagatagt
gaggctgcaaagatctatatgcagctgtctaggaaggatccccccatcaaactgctttat
gccactcctgagaaggtgtgtgcaagtggacgaatgatcagtgcccttcagaatctgtat
gaaaggggtctgctggctcgcttagtcattgacgaggcccattgcgtcagtcagtggggt
catgacttcaggccagacttcaagcgcttgcatgagctcaggcggatgtttcccagtgtt
cctataatggcactgacggccactgccactcctagagttcagaaagatattcttaaccag
ctagcaatgacccgtcctcaggtattcactatgagcttcaacaggcacaatctcaaatat
tcagtattgccaaaaaaacccaagaaggttgatgaggaatgcattcagtggatcaagaaa
tattacccacgtgactcggggattgtgtactgcttgtctcgtaatgactgcgacactctg
gctgtcagtcttcagagggctggaatcgcagcgctggcatatcacgctggcctgagtgac
agtgacagggaatatgtccagaataaatggatcaaccaggatggctgccaggttatgtgt
gccaccattgcgtttggcatgggaatcgataagccagatgtgcgttatgtgatccatgcc
agtttgcccaagtcaatggagggttattaccaggagtcaggcagagctggtcgagatgga
gagatttcccactgcgtcctcttctattcctacagtgatgttatccgcatcaagagactc
atcgctatggataaagatggcaaccagcaatccaaagccacccacatcaacaacctgcac
agcatggtgcatttctgtgagaacgtggccgagtgcaggagaatccagttgctggcttac
ttcggcgagcacacattcaatacaagcttctgtaaagagcatcctgaggtcatctgtgac
aattgtgccagaccacataaatataaatcaagaaatgtcaccgacgatgtgaagaagatt
gtgaggtttgtgcaggagaactgtgagaaggttggaaaccgatacggcaaatctgcccag
cagaacaggctcactctcaacatgctggtcgacatatttctgggctctaaaagtgctcgg
atccagtctggaatgttcagggaaggagcagcatattccaaacacaatgctgagaggctt
tttaagaaactggtgctggatagtgttctgatggaggacctctacatcactaacaatatg
caggcagtggcctatatctctgctgggcctaaagcaatgagtgtactgagtggctgcatg
caggttgagtttattgagacagagagtgcgtccagcatcagaaagcacaaagcctctgtg
attgagaacgtttctaagagagaggagatggttaaaaaatgtctacaggaactcaatgat
ctgtgcaagaagttgggcaaagtcttcggcattcattactacaacattttctccacagcc
acactcaaaaagattgctgaaactctctcgtctgatccggaggttctgctgcagattgat
ggtgtgactgaagacaagctggagaagtatggagctgaggttattgaactgctgcagaag
tactccgagtggcagctgcctgctgaggcacagacagagagttcaggatggattgacaca
acaagaggccatcaaaacgaggaagatgacgatgatgaaggggacaccacatcaacctat
ttcagaagcacctctggacgaggagcaaagagaaagcaagggtcttactccaggaaaccc
aaaagaagaaaaggtgccagcggccaaaactcctcctctaaaggtggatgcagcaataac
tggtcttcatcaagaggaggaagaggaggatacaggggtggtaatcgaagtgcaggcaga
ggttccaggccggctccatcagtcccagcagtgaagaggcccggcttcatggctttgccc
accccacagactgctgctcgtccattcctcaaaccaatattctctcacctctag
DBGET
integrated database retrieval system
