Onychostoma macrolepis: 131527514
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Entry
131527514 CDS
T09350
Symbol
thoc1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
omc
Onychostoma macrolepis
Pathway
omc03013
Nucleocytoplasmic transport
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131527514 (thoc1)
09122 Translation
03013 Nucleocytoplasmic transport
131527514 (thoc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131527514 (thoc1)
03041 Spliceosome [BR:
omc03041
]
131527514 (thoc1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131527514 (thoc1)
Spliceosome [BR:
omc03041
]
Complex C
Other components
EJC/TREX
131527514 (thoc1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131527514 (thoc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
131527514
NCBI-ProteinID:
XP_058612651
LinkDB
All DBs
Position
02:complement(7155183..7166388)
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AA seq
655 aa
AA seq
DB search
MSPPSHFDFIEARDKFTAATKSAVDIRNCKPLTNAFGHLPGNETEKKATLDQALRGVLEE
QIVKQKVNVEDFLSLIYISIDGVTEGICSATTPFLLLGDVLDCLPLDQCDKIFSFVEENV
STWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLDNITVFNKNEQDSTLGLQHTEVKEEGMEVEEGEMGEEDAPAPCSIPIDYNLYRKFWT
LQDYFRNPVQCYDKFSWMTFLKFSDETLAVFKSFKLDDMQASKRKLEEMRTAAGDHVYFA
KFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSSCVLNDDQSLWIEDTTKL
VYQLLRETPPDSDKFASMVEHILNTEENWNTWKNEGCPSFVKERPAETKPIRPSRKRQAP
EDFLGKGPDRKILMGNDELTRLWNLNPDNMEACKSDSREFMPSLEDFFVEAIEQADPSNM
VEEEYKVVRNSNYGWRALRLLSRRSPHFFQPTNQQFKSLADYLENMVIKLAKELPKDLPS
EEIKTGEEDDDENGDNLLKESNDSPSIQSKAVTNSQMDEIAAKLGSQWKTLADHLEMSEK
EIRVIESDSEDVELQAKMLLVAWQDREGSQATMESLVTALNSAGFSNIIEGLSET
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgccgtctcacttcgacttcattgaagccagagataaatttacggctgccact
aaaagtgctgtagatatcaggaactgtaaacctctgaccaacgctttcggccatctgcct
ggaaatgaaactgagaagaaagccactctcgatcaagccctgcgtggagttcttgaagag
cagattgtgaagcagaaagtgaatgttgaagatttcctttctctgatctacatcagtata
gacggtgtgactgaaggcatctgctctgctaccactccctttcttctgctgggagatgtt
ctggactgccttcctctggaccagtgtgacaaaatcttctcctttgttgaagaaaatgtc
tctacgtggaaatctaataccttttactctgctggaaaaaattacttattaagaatgtgc
aatgacctgctcaggagactctctaagtctcagaatacagtgttttgtggacgaatccag
ctgttcttagcacgtctgtttcctttgtcagaaaaatcaggcctgaacttacagagtcaa
ttcaaccttgataacatcacagtgttcaacaaaaatgagcaggatagcacacttggactg
cagcacacagaggttaaggaggaagggatggaggtggaggagggagagatgggcgaggaa
gatgcaccagctccctgctccattcctattgactacaacttgtacagaaaattctggacc
ctgcaggactatttcagaaaccctgtacagtgctacgacaagttctcatggatgactttc
cttaagttttcagatgagacactagctgtgttcaagagcttcaaactggatgacatgcag
gcgtcgaagagaaagctggaggagatgaggactgctgctggagaccacgtctactttgcc
aagttcctcaccagtgaaaaattgatggaccttcagctgagtgacagcaacttcagacga
cacattctgcttcagtatctcatcctcttccagtatctcaagggccaggtcaagttcaag
agttccagctgtgttttgaatgacgatcagtctttgtggattgaggacacaaccaaacta
gtctatcagttactgagagaaacccctccggatagtgacaagtttgcgtcaatggttgag
cacatcctgaacacagaagaaaactggaacacttggaaaaacgaaggctgtccaagcttt
gtgaaagaaagaccggcagagaccaaacccatccgtcccagcagaaagagacaagcacca
gaggactttttggggaagggccctgatcgcaaaatcctcatgggaaatgatgaactcaca
aggctctggaatctaaatcctgacaatatggaggcctgcaagtcagatagcagggagttc
atgccatcactggaggacttttttgtggaagctatcgaacaggcagatccatcaaacatg
gtggaggaagaatacaaagttgtgcgtaactcaaactacggctggcgagccttgcgattg
ctctccagaaggagccctcacttcttccagcccaccaaccagcaattcaagagtctggca
gactatctggaaaacatggtcatcaaactggccaaagagcttcctaaagaccttccttct
gaggagataaaaacgggagaggaggatgatgatgagaatggtgataacctgttaaaagag
agcaatgacagtcccagcattcagagcaaggccgtgaccaacagtcagatggatgagatc
gcagccaagcttgggtcccagtggaagacgctggcagaccacctggagatgagcgagaag
gagatccgcgtgatagagtctgacagcgaggatgtagaactacaggccaagatgctgctg
gtggcctggcaggaccgagaaggctctcaagctacgatggagagcctggtcacggctctg
aactcggctggtttcagtaacatcattgaaggtctcagtgaaacataa
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