Onychostoma macrolepis: 131528479
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Entry
131528479 CDS
T09350
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46 isoform X1
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131528479 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omc03041
]
131528479 (ddx46)
Enzymes [BR:
omc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131528479 (ddx46)
Spliceosome [BR:
omc03041
]
Complex A
U2 snRNP components
U2 related factors
131528479 (ddx46)
Complex B
131528479 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
PMI_typeI_cat
Motif
Other DBs
NCBI-GeneID:
131528479
NCBI-ProteinID:
XP_058613613
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All DBs
Position
21:544951..563999
Genome browser
AA seq
1030 aa
AA seq
DB search
MGRESRHYRKRSGSRSKSRSPDSKRSKKEEQTGSRTRERSRRERSRSRERRRSRSRDRKR
QRRSRSRERRRSRSRERRSRGRSKEKSENVEPSADKKKVKEEKEEEKAEDQDFDQNTLEE
EMRKRKERVEKWREEQRKKAMENIGEIKKELEEMKQGKKWSLEDDEDDDEETQAPAEPDG
EEEEEEKDGPAEAEEVLSIEQETGEELDPLDAYMEEVKEEVKKFNMGTMKGGNDKQKGSV
SVTKVVTVVKTKKMVHSTKKKGELMENDQDAMEYSSEEEEVDLQTALTGFQTKQRKVLEP
VDHQKIEYESFRKNFYVEVPELARMSPEEVNEHRLELEGIIVKGKGCPKPIKMWVQCGIS
MKVLNAMKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHILDQRLV
GEAEGPIAMIMTPTRELALQITKECKKFSKSLGLRVVCVYGGTGISEQIAELKRGAEIIV
CTPGRMIDMLGANNGRVTNLRRVTYVVMDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFS
ATFPRTMEALARRILSKPIEVQVGGRSVVCSDVEQHVIVIEEEKKFLKLLEILGHYQEKG
SVIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAA
RGLDVKQLILVVNYGCPNHYEDYVHRAGRTGRAGNKGYAYTFITGEQARYSGDIIKALEL
SGSPVPPELELLWTNFKEQQKAEGKSIKSSSGFSGKGFKFDETEHALANERKKLQKAALG
LHDSDDEDQALDIDEQIESMFNSKKRVKDFSAPGGAAGGGGGGMSGSMTAVSGLSGMSTP
SAGNIQKLEIAKKLALKIQAQKNLGAEAQDVMQQATNAILRGGTMIAPSVSAKTIAEQQA
EKINAKLNYTPVEKLEEERQAAEAAETVKRYEEELEINDFPQTARWKVTSKEALQRIGEY
SEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQ
PTSKSRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagagtcgaggcattacaggaagcgctccggctccaggtccaagagccgctcg
ccggactccaagcgctcgaagaaggaggagcagacggggtcccgcacccgcgagcgcagc
cggagagagcggtcacgcagccgagagcgccgcaggtcacgctccagagaccgcaagaga
cagaggcgctccaggagccgagagcggagacggtcccgcagccgagagcgccggagccga
gggaggagcaaggagaagtcagagaatgtagagccgtccgctgacaagaagaaggtcaag
gaggagaaggaggaggagaaggctgaagatcaggactttgaccagaacacgctggaggag
gagatgaggaagaggaaggagcgagtggagaaatggagggaggagcagaggaagaaagcc
atggagaacatcggagaaatcaagaaggagctggaggagatgaagcaggggaagaagtgg
agtctggaggacgatgaagatgacgatgaggagactcaagcgcccgcggagccggacgga
gaggaagaggaggaagagaaagacggaccagctgaggcagaggaggtgttgagtatagag
caggagaccggagaggagctggacccgctggacgcttacatggaggaggtcaaagaggag
gtcaagaagttcaacatgggcaccatgaaaggaggcaacgacaagcagaaaggcagtgtg
tctgtgaccaaagtggtgaccgttgtgaagacgaagaagatggtgcacagcaccaagaag
aaaggagagctgatggagaacgaccaggatgccatggagtattcatcagaggaagaggaa
gtggacttgcagacggccctcacaggctttcagaccaaacagaggaaagttctggagccg
gttgatcatcagaagatcgagtatgaatccttccgtaagaacttctatgtggaagtgccg
gagctggccaggatgagccctgaagaggtgaacgagcaccgtctggagctggagggaatc
atcgtcaaaggcaaaggctgtccgaagcccatcaagatgtgggtgcagtgtgggatttcc
atgaaagtgctgaacgcgatgaagaaacacaactatgagaagccgaccccgatccaggcc
caggccatcccggccatcatgtcgggacgtgacctcatcggcatcgctaaaacaggaagt
gggaagaccatcgccttcctgctgcccatgtttcgtcacatattagaccagcggctggtg
ggagaggcagaaggacccatcgctatgatcatgaccccgacacgcgagctggcgctgcag
atcaccaaagagtgcaagaagttctccaagtctctgggtctgcgtgtggtgtgtgtgtac
ggcggcaccggcatcagcgagcagatcgcagagctgaagcgcggcgcagaaatcatcgtc
tgcacaccgggacgcatgatcgacatgctaggtgccaacaacggtcgcgtgaccaatctg
cgcagagtcacgtatgtggtgatggacgaggccgaccggatgttcgacatgggctttgag
ccgcaggtgatgcgtatcgtggataacgtgcggcccgaccggcagacggtgatgttctcg
gccacgttcccgcgcacgatggaggctctggcgcgcaggatcctgtccaaacccatcgag
gtgcaggtgggcggccgcagcgtggtgtgctcggacgtggagcagcatgtgattgtgatc
gaggaggagaagaagttcctgaagctgctggagattctgggtcactatcaggagaagggc
tctgtcatcatcttcgtggacaagcaggagcacgccgacggcctcctgaaggacctgatg
aaggcctcgtacccctgcatgtccctgcacggaggcatcgatcagtacgacagggacagc
atcatcaatgacttcaagaacggcgcgtgtcgtctgctggtggccacctcggtggcggcg
cgaggcctggacgtcaagcagctcatcctggtggtcaactacggctgtcccaaccactac
gaggactacgtgcaccgcgccggacgcacgggacgagccgggaacaagggttacgcatac
accttcatcactggagagcaggcgcgttactccggagacatcatcaaggcgctggagctg
tccggatcgcccgtcccgccggagctcgagctgctctggactaacttcaaagagcagcag
aaagccgaggggaagagcatcaagagcagcagcgggttctctgggaagggctttaagttc
gacgagacggagcacgcgctggctaacgagaggaagaagctgcagaaggctgcgttaggc
ctgcacgactctgacgacgaggatcaggctctggacatcgacgagcagatcgagagcatg
tttaactctaagaagcgagtgaaggatttctctgctccgggcggcgctgcgggaggtggt
gggggcggcatgagcggatccatgaccgctgtgtccggtctgagcggcatgagcactccg
tccgccgggaacatccagaaactggagatcgccaagaaactggccctcaagatccaggcg
cagaagaacctcggcgcggaggcacaggatgtgatgcagcaggccacaaacgccatcctg
cgcggcgggacgatgatcgcgccctccgtctcggccaagaccatcgcggagcagcaggcg
gagaagatcaacgccaaactcaactacacgccggtggagaagctggaggaggagcggcag
gccgccgaggccgcggagaccgtcaagagatacgaggaggagctggagatcaacgacttc
cctcagacggcgaggtggaaggtaacgtctaaggaggctcttcagcgcatcggcgagtat
tcagaggcggccatcactatacgaggaacctacttcccgccgggcaaagagcccaaagag
ggagagcgcaagatctacctggccatcgagagtgcgaatgaactggctgtgcagaaggcc
aaagcagaaatcacacggctgatcaaagaagagctgatccgtctgcaaaactcctaccag
cccaccagcaagagccgatacaaggttttgtag
DBGET
integrated database retrieval system
