Onychostoma macrolepis: 131532203
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Entry
131532203 CDS
T09350
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
omc
Onychostoma macrolepis
Pathway
omc03250
Viral life cycle - HIV-1
omc04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
131532203 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
131532203 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131532203 (samhd1)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
131532203 (samhd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
PDEase_I
Motif
Other DBs
NCBI-GeneID:
131532203
NCBI-ProteinID:
XP_058619678
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Position
23:29867264..29897469
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AA seq
624 aa
AA seq
DB search
MDRAIKRPREDDCVPPERQLIDAEYKRWGVAETGAFLRREGLQQWTQTFTEHGITGSGLP
YLTEALLEKMGIWPLGSRLQVLHCLQKLWQVSEESMKVFNDPIHGHIELHPLLLRFIDTP
QFQRLRHIKQLGGTYLVFPGASHNRFEHSVGVGYLAGCLVQALNERQPELLITKRDVLCV
QIAGLCHDLGHGPFSHMFDGMFIPKVRPGQKWKHEMASVQMFDHLVKVNGLEEVMVHHGL
TLPDDLIFIKEQIAGPPDDCVLDRSWPYKGRPMEKSFLYEIVANKRNGIDVDKWDYFARD
CYHLGIQNNFDYQRFLKFARVCKVRGKKHICTRDKEVGNLYDMFHTRNCLHRRAYQHKVG
NIIETMITEAFVKADPHIQIQGSSGRIFTISSAIEDMEAYTKLTDHVFEQILYSSAPELS
EARAILHNIVCRRLYKCVGQTTPESHVDASPEKLLDWAEEVACAKPSGTDASLIAEDFVV
SVIHMDYGMKEKNPINNVHFYCKKDPTKAIKIRKKQVSKLLPECFAEQLIRVYCKKTDDK
SLEAAKKYFVQWCMNRNFTKPQDGDIIAPELTPLKRDWHTLERGDEDSDGSDEDHRPGTR
EETPRKTGHNVKVNLFQAQEDRRL
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggacagagccatcaaacggccgcgagaagacgactgtgttcccccggagaggcagctc
atcgacgcggagtacaagcgctggggcgtcgcggagaccggcgcgtttctgcgcagagag
ggactgcagcagtggacgcagactttcacagaacatggcataacagggtcagggctgccg
tacctcaccgaagcacttctggagaagatgggcatctggcctctggggtcgcgcctgcag
gtcctgcactgtcttcagaagctctggcaggtctcggaggagtccatgaaggtgttcaac
gaccccatccacggccacatcgagctgcacccgctgctgctgcgcttcatagacacgcct
cagttccagcggctgcgccacatcaagcagctgggaggaacctacctggtgttccccggg
gcgtcccacaaccgcttcgagcactccgtcggggtgggctatctggccggatgtctggtc
caggctctcaatgaaaggcagccggagctcctcataacgaagcgggacgtgctgtgtgtg
cagatcgcaggcctgtgccatgacttgggtcacgggccgttttctcacatgtttgatggc
atgttcatccctaaagttcgacctggtcagaaatggaagcacgagatggcctcggttcag
atgtttgatcacctggtgaaggtcaacggtctggaggaggtcatggtgcaccacgggctg
actcttcctgacgacctgatattcattaaggagcagatcgccgggccgccggacgactgc
gtcttggaccgatcgtggccgtataagggcaggccgatggagaaatcgttcctgtacgag
atcgtagcaaacaaaagaaacggtatcgacgtggataagtgggactacttcgcaagggat
tgttaccacctcggcattcagaacaacttcgactaccagcgcttcctcaaatttgcgcga
gtgtgtaaagtgagaggaaagaaacacatctgcaccagagacaaggaagttggcaatctc
tatgacatgttccacactcgtaactgcctccatcgccgggcgtatcagcacaaagtgggc
aacatcattgagaccatgataacggaggcttttgtgaaagctgatcctcatattcagatc
cagggctcttccgggaggatcttcaccatctcttcagcgatagaagacatggaggcctac
accaaactcacagatcacgtgtttgagcagattctgtactcgtctgcgccggagctgtct
gaggcacgagccatcctccacaacatcgtctgcagacggctgtacaagtgtgtggggcag
accacgccagagagtcacgtggacgcctcaccggagaagctgctggactgggcagaggag
gtcgcctgtgcaaaacccagcggcacagacgccagcctgatagctgaggactttgtagtt
agtgtcattcacatggattatggaatgaaggagaaaaaccccatcaacaatgtccacttt
tactgcaagaaagatcccaccaaggccatcaagatccgcaaaaaacaggtgtccaaactc
ctgccggagtgctttgcggagcagctgatcagggtttactgtaagaagactgatgacaag
agccttgaagctgctaagaagtactttgtccagtggtgcatgaacaggaacttcaccaaa
ccccaggatggagacatcatcgcccccgagctcaccccactcaaacgggactggcacacg
ctggagcgaggcgacgaggacagtgatggcagcgatgaagaccatcgtcccggaacgaga
gaggaaacgcccagaaagactgggcataatgtgaaagtcaacctctttcaagctcaggag
gaccgcagactctga
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