Onychostoma macrolepis: 131545252
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Entry
131545252 CDS
T09350
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
omc
Onychostoma macrolepis
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
omc01009
]
131545252 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131545252 (hdac6)
04131 Membrane trafficking [BR:
omc04131
]
131545252 (hdac6)
03036 Chromosome and associated proteins [BR:
omc03036
]
131545252 (hdac6)
Enzymes [BR:
omc01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
131545252 (hdac6)
Protein phosphatases and associated proteins [BR:
omc01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
131545252 (hdac6)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
131545252 (hdac6)
Membrane trafficking [BR:
omc04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
131545252 (hdac6)
Chromosome and associated proteins [BR:
omc03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
131545252 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
131545252
NCBI-ProteinID:
XP_058639882
LinkDB
All DBs
Position
08:24694822..24709618
Genome browser
AA seq
1089 aa
AA seq
DB search
MDPVPNFKGSTRSPRGAPETKRENNNSNHKKNLQEARRKGRMDRSKEEEEMSNELQNLDV
RGKTKATGTGLVYVDAFTHFHCLWDASHPECPARVSSVMEMLEMEGLLGRCVRVEARAVS
EDELLLVHTKEYVELMKSTQKMTEEELKTLADKYDSVYLHPEFFTSSCLAVGSVLQLVDK
VMASQLRNGFSINRPPGHHAHADKMNGYCMFNNVAIAARYAQKQHGVKRVLIVDWDVHHG
QGIQYIFEEDPSVLYFSVHRYEDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMEDG
DYVTAFQQLLLPVAYEFQPQLVLVAAGFDSVIGDPKGEMRVSPQCFSVLTHMLKGVAQGR
LVLALEGGYNLQSTAEGVCASVRSLLGDPCPHLISPGAPSESALKSISNTISALYPFWKS
LQTFEGGPLSDVPPLPAPVCAEVKASSAITGLVYDQRMMLHHNMWDGHHPELPQRISRIF
CRHEELGLLSRCLRIPARLATEEELALCHSSEHISTIKSTEHMKPRDLHRLGNNYNSIYI
SSESYTCALMAAGSCFNSIQAILTGQVRNGVAIVRPPGHHAEKDTACGFCFFNTAALTAR
YAQSITHDSLRVLILDWDVHHGNGTQHIFEEDDSVLYISLHRYEDGTFFPSSEDANYDKV
GQGKGRGYNVNIPWSGGKMGDPEYLAAFHHIVMPIAREFAPELVLVSAGFDAARGDPLGG
YQVTPEGYAHLTHQLMSLAAGRVLVILEGGYNLTSISESMSMCTSMLLGDSPPPLDHLPP
PKTNATVTINNVLRAFAPFWSSLRIQIPESLRLALPSPKSKGKRASAGKGKKSPRQSTPG
QTLEHLEQSGLDELSKDLLSLNLNTSTSSNPCPASVPIGGARRKVKPTPQRDSAGRESDS
PLKLKSEKARAGEDTHAEITTVKTETPDRTILESVVTGNLAAVDDQKDSVLEAAGGQATM
MSVLESVFGAQATDLDTMYVVDPLPWCPHLESVQPVPAGGIDVFLPCEECGGDTENWICL
FCYKVLCGRYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYVHNKVLHEAKNAAHLVK
FGEDIPPFN
NT seq
3270 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgttccaaatttcaaaggttctactcgatcaccgagaggagcaccagaaacc
aaaagagaaaacaacaattcaaaccataagaagaatctacaggaggcgcggaggaagggc
agaatggatcggagcaaagaggaagaggagatgagcaatgagctccaaaacttggatgtt
cgtggtaagactaaagcaacaggaacaggtctcgtctacgtagatgcctttactcacttt
cactgcctctgggatgccagtcacccagagtgtccagcgagagtgagcagtgtgatggag
atgctggagatggaaggtctgctgggacgctgcgtacgagtagaggcccgagctgtgtca
gaagacgagctgttactcgttcatacgaaggagtatgtagagctgatgaaatccactcag
aaaatgacagaggaggagctgaagactctggctgataaatatgactcggtctaccttcat
cccgagtttttcacctcctcttgtctggcagtgggatcagttctccagctggtggataag
gtgatggcatcacagctgcgtaacggcttctccatcaacaggcctcctggtcaccacgct
catgcagataagatgaacggctactgtatgtttaacaatgtggccatagcagcacgctat
gctcagaaacagcatggagttaaacgagttctgattgtggattgggacgtgcatcacgga
cagggaatccagtatatttttgaagaggatcccagtgtgctgtatttctcagtgcacaga
tatgaagacggctcgttctggccgcacctcaaggagtctgacagcagttcggtgggttca
ggagcaggacagggctacaatatcaacctgccctggaacaaggtagggatggaggatgga
gattacgtcacagctttccagcagcttctcctgcctgtggcgtatgagttccagcctcag
ctggtgttagtggcggctggatttgactctgtgatcggcgacccaaagggtgagatgaga
gtgagtccgcagtgtttctccgtcctcacccacatgctgaaaggtgtagcacagggccga
cttgtgctggctcttgagggtggatataacctccagtctacagcagagggtgtttgtgct
agtgtgaggtcactgctgggtgacccttgccctcatctgatctctcctggtgctccgagt
gaaagtgccctgaagtccatctcaaacaccatctcagccttgtatccgttttggaagagt
cttcaaacgtttgagggtggtcctctgtccgatgtccctcccctgcctgctccagtgtgt
gcagaagtgaaggcttcctctgcgatcactggactagtttacgaccagagaatgatgctt
catcacaacatgtgggacggtcatcatcctgagctccctcagagaatttcacgcatcttt
tgccggcatgaggagttgggtctgctgtcccgttgccttcggataccagctcgcctagca
acagaagaagagctggcactctgtcacagttctgagcacataagcactataaagagtaca
gagcacatgaaacccagagatctgcaccgactgggaaacaattacaactccatctacatt
agtagtgaaagctacacctgcgccctgatggctgctgggtcatgttttaactccatacag
gccatactcacaggccaggtgagaaacggtgtggccatagtccgtcctcctggtcatcat
gcagagaaagacacggcttgtggtttctgtttctttaatacggccgctttgaccgcacgc
tatgcccagagcatcactcacgattccctgcgcgtcctcatcctcgattgggatgttcat
catggaaacggcacacagcacatctttgaggaggatgacagcgttctgtacatctctctg
catcgctacgaagacgggacattcttccccagttcagaggatgcgaactatgataaggtg
gggcaagggaaaggcagaggatacaatgtcaacatcccctggagtggagggaagatggga
gacccagaatacttggcggctttccatcacatagtgatgccgatagccagagagtttgcc
ccggagctggtgctggtctctgctgggtttgatgcagcacgaggtgatccgttaggaggg
tatcaggtgaccccagagggctacgcccacctcacccaccagttaatgagcctggctgca
ggaagagtgctagtcatactggagggaggatataacctcacctccatctctgagtcaatg
tccatgtgcaccagtatgttgctaggagactcacctccacctctagaccatctgccgcct
ccaaagaccaacgccactgtcacgattaacaatgtcctgcgtgctttcgcccccttctgg
agctctctgagaatacagattccagagtcacttcgtttggctttgccgtctcctaaatcg
aaaggcaagcgggcatcggcgggcaagggcaagaaatctcctcgccagtccacccctgga
cagacacttgagcatcttgagcagtcgggccttgatgagctcagtaaggacctgctctct
ctgaatctcaacacgagtacctcatctaacccctgcccagcatcagtccccatcggagga
gccagacggaaggtgaaacccaccccacagagggattcagcaggccgggagtcagattca
cccctaaaactcaagtcagagaaagccagagctggagaagacacgcatgcggagattacg
acggtaaaaacagagacgcctgaccggacaatcctggagtctgtggtcactggaaattta
gctgccgtggatgaccagaaggactcagtgctggaggccgctggtggtcaagccactatg
atgtcagtcttagaaagtgtctttggagcacaagccacggatttggacaccatgtatgtg
gtggacccattgccatggtgcccacacttggagtcagtgcaaccggtgcccgcaggtggc
atcgatgtcttcctgccgtgtgaagagtgtggaggtgatacagaaaactggatctgcctc
ttctgctacaaggtgctctgcgggcgttatgtgaaccagcacatggtgacccacgggcag
gagtcgggtcaccctgtggtgctgagcttcgctgacctctctgtctggtgctacgcttgt
gagtcatacgtccacaacaaggtgctccatgaagccaaaaatgccgctcacctcgtgaag
tttggagaggatattcctcctttcaactaa
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