Onychostoma macrolepis: 131550513
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Entry
131550513 CDS
T09350
Symbol
lig4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
omc
Onychostoma macrolepis
Pathway
omc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
131550513 (lig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omc03400
]
131550513 (lig4)
Enzymes [BR:
omc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
131550513 (lig4)
DNA repair and recombination proteins [BR:
omc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
131550513 (lig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
BRCT
RNA_ligase
RTT107_BRCT_5
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
131550513
NCBI-ProteinID:
XP_058648607
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All DBs
Position
01:complement(26474901..26480708)
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AA seq
910 aa
AA seq
DB search
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSDSTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPEANKLLNYRA
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYNVTTDLNKVCRKLHDPSVS
LSEVSIDLFSAFKPMLAAVVNIRQIEKQMGNRTFYIETKLDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEIIETIFTPVKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLEEGIVVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYSRNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYQCM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVSKPKKTIGVIDHFKSQDLSAVTKE
TDMFEDVEFCVINGNDEHSKAELEKVVARCGGIVVQNPGKDTYCVIAAVQNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRDHFAKEYDWYGDSYYVDTDEQQLR
EVFDRIGPTEAERSSVAQIEAENAWDDLPTSMFRPYTAYFDRCADLGDPKTIIRGTSLDT
RALEFRFHGGTVVEKLKEGFSHVIVESERRTLNFKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETDYLI
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccattcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagac
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcgcttcac
aaggacaattccgatagcacagattcattttacgcagccatgcgtcttatcgtgcctcaa
tttgagcgagagcgaatggcttacggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctacctaaaaatggacctgaagcaaacaaacttctaaattacagagct
ccaaccacaagtcaaggagaagcaggtgatttcgctcttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcattaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacccagagttcagcattggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatcctgatgcaccagaactc
tacaatgtcaccacagatctgaataaagtctgccgaaagcttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgtc
aacatcagacagatagagaagcaaatgggcaaccggacattctatattgagacaaagctt
gatggtgaacgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacgcaacagtttggggcctctccactagagggctccctcacaccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatactggatggagagatgatggct
tataacccgacaactgagaccttcatgcaaaagggcagtaagttcgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgcgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgaacctctcaagaagcgctacgaaattattgagactatctttacg
ccagtcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagta
gtgaattctctcaatgaggccattgacaatctggaagaggggattgtggttaaggatccc
atgtccatctacaaaccagataaacggggtgaaggatgggtgaaaattaagcctgaatat
gtggatggtctgatggatgagcttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacggttttccacaccctctgccgcattggatcaggctacaccatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaagtttacagcagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccacgcaactcg
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgtttccccagaatagaaagaatccgagaagacaaagagtggtatcagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcatccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtatccaagcccaag
aagacaatcggagtcattgaccactttaaatctcaggatttatcagcagtcaccaaagag
acggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaacattccaaa
gcagagcttgagaaagttgtggcccgctgtggaggcattgttgtgcagaaccctgggaaa
gacacgtactgtgtgattgcagctgtgcagaacatgagagtaaagaacctcatctcctca
gaccagcatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccatggcaaccacgtcacatgatccacatgtcaccttcaaccagggaccacttcgct
aaagagtatgattggtatggagacagttattatgttgacactgatgagcaacagctgagg
gaagtctttgataggattggccccacagaagctgaacgttcatctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatgtttaggccttacactgcatacttt
gaccggtgtgctgacttgggagatccaaaaaccatcatacgtggtacaagtttggacaca
cgtgccttagaattccgattccatggtggtacagttgtggagaaactgaaggaaggattc
tcgcatgtcatagtagaaagtgagagaagaactctgaacttcaagacgctgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
cacgtagaggatgagactgactacctaatataa
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