KEGG   Onychostoma macrolepis: 131550513
Entry
131550513         CDS       T09350                                 
Symbol
lig4
Name
(RefSeq) DNA ligase 4
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
omc  Onychostoma macrolepis
Pathway
omc03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:omc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    131550513 (lig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omc03400]
    131550513 (lig4)
Enzymes [BR:omc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     131550513 (lig4)
DNA repair and recombination proteins [BR:omc03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     131550513 (lig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_IV BRCT_2 DNA_ligase_A_C BRCT RNA_ligase RTT107_BRCT_5 mRNA_cap_enzyme
Other DBs
NCBI-GeneID: 131550513
NCBI-ProteinID: XP_058648607
LinkDB
Position
01:complement(26474901..26480708)
AA seq 910 aa
MMEGASKSDATPQTAVAAQVPFIDLCTVLENIQKTKLRPDKGKILKDFIDSWRNFHAALH
KDNSDSTDSFYAAMRLIVPQFERERMAYGIKENMLAKLYIEVLGLPKNGPEANKLLNYRA
PTTSQGEAGDFALMAYFVLKKRCTSQGNLSIKEVNDFLDSVAINNASKQKDQVKKSLLHL
ITQSSALEQKWLIRMILKDMKLGISKETVLQVFHPDAPELYNVTTDLNKVCRKLHDPSVS
LSEVSIDLFSAFKPMLAAVVNIRQIEKQMGNRTFYIETKLDGERIQLHKAGDVYKYYTRN
SYEYTQQFGASPLEGSLTPYIHNVFKPHVVNCILDGEMMAYNPTTETFMQKGSKFDIKRL
MDDSDLQTCFCVFDVLLVNNQKFANEPLKKRYEIIETIFTPVKGRIQLVTKSEGKTMQEV
VNSLNEAIDNLEEGIVVKDPMSIYKPDKRGEGWVKIKPEYVDGLMDELDLLIVGGYWGKG
RRSGMLSHFLCAVAEVPSPGEKPTVFHTLCRIGSGYTMKELYDLGLKLAKHWKVYSRNNP
PAAILCGTEKPEVYIEPRNSVIIQVKAAEIVSSEMYKTNCTLRFPRIERIREDKEWYQCM
TLAELSQFRSRASGKLASRHLHIQEDQPEKKKHKFVSKPKKTIGVIDHFKSQDLSAVTKE
TDMFEDVEFCVINGNDEHSKAELEKVVARCGGIVVQNPGKDTYCVIAAVQNMRVKNLISS
DQHDVVWATWLLECLENKQVIPWQPRHMIHMSPSTRDHFAKEYDWYGDSYYVDTDEQQLR
EVFDRIGPTEAERSSVAQIEAENAWDDLPTSMFRPYTAYFDRCADLGDPKTIIRGTSLDT
RALEFRFHGGTVVEKLKEGFSHVIVESERRTLNFKTLRRLYAKKFKIVRESWVTDSIKAG
HVEDETDYLI
NT seq 2733 nt   +upstreamnt  +downstreamnt
atgatggaaggtgcctcaaaaagtgatgccacaccacagacggctgttgctgcacaagtt
ccattcatcgacctctgcacagttctggagaacatccaaaagaccaaactccgaccagac
aaaggcaaaattctaaaggattttattgattcttggaggaacttccatgcagcgcttcac
aaggacaattccgatagcacagattcattttacgcagccatgcgtcttatcgtgcctcaa
tttgagcgagagcgaatggcttacggtataaaagaaaacatgcttgccaaactatatatt
gaagttttaggcctacctaaaaatggacctgaagcaaacaaacttctaaattacagagct
ccaaccacaagtcaaggagaagcaggtgatttcgctcttatggcctacttcgtcctgaaa
aaaaggtgtacaagtcaggggaatttaagcattaaagaagtcaatgacttcttggattcc
gtagctatcaacaatgccagcaaacagaaggatcaagtgaagaaaagccttttgcatctg
ataacccagagttcagcattggaacagaagtggctcattagaatgatcctcaaggacatg
aaacttggcattagcaaggagacagtacttcaggttttccatcctgatgcaccagaactc
tacaatgtcaccacagatctgaataaagtctgccgaaagcttcatgatccatctgtgtcc
ctcagtgaggtctccatcgatctgttttctgcttttaaaccaatgctggctgctgttgtc
aacatcagacagatagagaagcaaatgggcaaccggacattctatattgagacaaagctt
gatggtgaacgcattcagctgcacaaagctggagatgtttacaaatactataccaggaac
tcttatgagtacacgcaacagtttggggcctctccactagagggctccctcacaccatac
attcacaacgtcttcaaacctcatgtggtaaactgcatactggatggagagatgatggct
tataacccgacaactgagaccttcatgcaaaagggcagtaagttcgatattaaaaggctg
atggatgactctgatttgcaaacctgcttttgcgtatttgatgtcttgttagtaaacaat
cagaagtttgcaaatgaacctctcaagaagcgctacgaaattattgagactatctttacg
ccagtcaaaggtcgtatccagttggtcacaaaatctgaaggcaaaaccatgcaagaagta
gtgaattctctcaatgaggccattgacaatctggaagaggggattgtggttaaggatccc
atgtccatctacaaaccagataaacggggtgaaggatgggtgaaaattaagcctgaatat
gtggatggtctgatggatgagcttgatctgctgatagtgggaggctactggggtaaaggc
aggagaagcgggatgctctctcattttctgtgtgcggtagcagaggtgccgagtccaggg
gagaagcccacggttttccacaccctctgccgcattggatcaggctacaccatgaaagaa
ctgtacgatcttggtctgaagttggccaaacattggaaagtttacagcagaaataatcct
ccagctgccatcttgtgtggaacagaaaaaccagaggtttacatagaaccacgcaactcg
gtgatcatacaagtcaaagcggcagagatcgtctctagtgaaatgtataagaccaactgc
acattacgtttccccagaatagaaagaatccgagaagacaaagagtggtatcagtgcatg
accttggctgaactgagccagttccgctccagagcttctggaaagctggcatccagacat
ctacatatccaagaggaccagcctgaaaagaagaagcacaagttcgtatccaagcccaag
aagacaatcggagtcattgaccactttaaatctcaggatttatcagcagtcaccaaagag
acggatatgtttgaagatgtggagttttgtgtgataaatggcaatgatgaacattccaaa
gcagagcttgagaaagttgtggcccgctgtggaggcattgttgtgcagaaccctgggaaa
gacacgtactgtgtgattgcagctgtgcagaacatgagagtaaagaacctcatctcctca
gaccagcatgatgtggtgtgggctacttggctgctggagtgtctggaaaataagcaggtt
ataccatggcaaccacgtcacatgatccacatgtcaccttcaaccagggaccacttcgct
aaagagtatgattggtatggagacagttattatgttgacactgatgagcaacagctgagg
gaagtctttgataggattggccccacagaagctgaacgttcatctgtggcacagatagaa
gcagagaatgcctgggatgacttgcccactagcatgtttaggccttacactgcatacttt
gaccggtgtgctgacttgggagatccaaaaaccatcatacgtggtacaagtttggacaca
cgtgccttagaattccgattccatggtggtacagttgtggagaaactgaaggaaggattc
tcgcatgtcatagtagaaagtgagagaagaactctgaacttcaagacgctgaggcgactt
tatgctaagaagttcaaaattgttcgagaatcttgggtgaccgattctatcaaagcaggc
cacgtagaggatgagactgactacctaatataa

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