Oleiphilus messinensis: OLMES_1345
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Entry
OLMES_1345 CDS
T04860
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ome
Oleiphilus messinensis
Pathway
ome03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ome00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OLMES_1345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ome03019
]
OLMES_1345
03400 DNA repair and recombination proteins [BR:
ome03400
]
OLMES_1345
Enzymes [BR:
ome01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLMES_1345
Messenger RNA biogenesis [BR:
ome03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
OLMES_1345
DNA repair and recombination proteins [BR:
ome03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OLMES_1345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
ARU55423
UniProt:
A0A1Y0I7P6
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All DBs
Position
1518317..1520140
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AA seq
607 aa
AA seq
DB search
MSKTMMDQARALLRELYGYDDFRGEQPHAIESLLNGRDTLVIMPTGGGKSMCYQIPALLR
EGVGIVVSPLIALMQDQVSALQQLGVPAAFLNSTLPPQAQQDVLHALQTQQIKLLYIAPE
RLLQSATLEQFKSFRVALFAIDEAHCVSQWGHDFRQDYLALGVLKDHFPDVPVAALTATA
DQRTREDIAQRLQLHEPTTLVGGFDRPNIRYSVMPRANARRQLLNFLDRFPGDAGIVYCL
SRQKVEKTAQWLVQQGYTALPYHAGLPADMRAEHQHRFLNEDGVIMVATIAFGMGIDKPN
VRFVAHLDLPKSIEAYYQETGRAGRDGEPAEAWMIYGLQDVVRLAQMVDQSGLNDQMKRF
ERQKLNGLLGWCEVARCRRQALLAYFDQAAPDHCGNCDICLNPPEMWDGTEAAQKLLSAI
YRTGQRFGAGHVLDTLMGKVTEKVTQNGHDRLSTFGIGQERALPDWQSVLRQLLVHGFVH
IDADRFGAIRLDESARPLLRGEVRLQLRKDLIKAEYMSSEKKTGSGTREKMDIAPQDQPL
WEALRACRKRLATEHGVPPYVIFHDKTLALMIEHRPQSLEDMAQLSGVGQAKLERYGQAF
LDQLQMT
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacgatgatggatcaagctcgcgccctgttgcgtgaattatatggatatgat
gattttcgaggcgaacagccgcacgctatcgaaagcctgctaaacggtcgtgataccttg
gttatcatgccgaccggcggcggtaagtcgatgtgttaccagatacccgccctattgcga
gagggggtgggcattgttgtgtcgccgttgattgcgttgatgcaggatcaggtttcggcc
ttgcaacaattgggtgtacccgctgcttttttgaattcaacgttgccacctcaggcgcag
caggatgtgttgcatgccctgcaaacccaacagattaaactgctttatatcgcccctgag
cgtttattgcagtctgcaacactagagcagttcaagtcttttcgcgtagccctgtttgcg
attgatgaagcccattgtgtgtcccagtggggacatgattttcgtcaggactatctggca
ttgggtgtgcttaaggatcactttccggatgtacccgtggcagcgctgacggcaacagcg
gatcaacgtactcgcgaagatatcgcacagcgcctgcagttgcatgagcccacgacactg
gtcggcggatttgatcgtccgaacattcgctacagtgtgatgccaagggccaatgcccgt
cgacagttgctgaattttctggatcgttttccaggtgatgcgggcatcgtttattgcctg
tcccggcagaaagtggaaaaaacggcacaatggctggttcagcaaggctataccgcattg
ccctatcatgcaggactgcccgcggacatgagggcggagcaccaacaccgttttttgaat
gaagacggggtgatcatggttgcaactatcgcttttggcatggggatcgacaagccgaat
gttcgttttgtagcccatctggatctacccaagagcatcgaagcctattatcaggagacg
ggccgggcggggcgtgatggtgagcctgcagaagcatggatgatctatgggcttcaggat
gttgtgagattggctcagatggtggatcaatcgggtctgaacgaccaaatgaaacgattt
gagcgtcaaaagttaaatgggttattggggtggtgtgaagttgcacgctgccgacgccag
gcgctcttggcgtactttgatcaagccgcaccggatcattgtggaaactgtgatatttgc
ctgaatccaccggaaatgtgggacggtaccgaagccgcccagaaattattgtccgcaatc
tatcgcaccggacaacgctttggtgcaggacatgtactggacaccttgatgggcaaagtg
actgaaaaggtcactcaaaatggccatgatcgcctcagtacctttggtatcggacaggag
cgggccttgccagattggcagtccgtattacgacagcttttggtacacggatttgtccat
attgatgctgaccgatttggtgcaatacgactggatgagtcggccagaccgctattacgg
ggcgaggtcagacttcaattgcgcaaagatctgatcaaagccgaatacatgagctccgag
aaaaaaacaggtagtggtacccgcgaaaaaatggatattgcgccccaggatcagccatta
tgggaagcgctgcgggcttgtcgaaaacgtcttgcaactgagcatggcgtgccaccgtac
gtgattttccatgataagacattggccctgatgatcgagcatcgcccgcagagcctggag
gatatggcgcagttatccggagttggacaggccaagctggaacgctatggccaggctttt
ctcgatcagctccagatgacctga
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