Oryzias melastigma (Indian medaka): 112136983
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Entry
112136983 CDS
T07439
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112136983 (trappc8)
Membrane trafficking [BR:
oml04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
112136983 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
112136983
NCBI-ProteinID:
XP_024114836
Ensembl:
ENSOMEG00000017264
LinkDB
All DBs
Position
LG4:31591207..31625746
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AA seq
1444 aa
AA seq
DB search
MAQCVQSVQEFLQDSFVPMVAVLCSKEADRVSRKNKLSFPELLRPFCRLLSEGHIRDPNN
QLQTVKNLRICVNAVNTNPVSSPAVLSPAQYRQLGEVVSSCQPLEGAAATTFKTGDYNLN
LSVTTPWFEAYRESFLQSMPASEHEFLNHYLACLLVVSSTEAVPVEQFLKLSQEQHRIQH
SGEYTHPRWFIPNTLKYYVLLHDVSEGDEQRAETVYEDMKQRYGPQGCYLLKINSRAVSA
EEDEQIPDPWSQYLHKNNLRYQDPGDAAPAAEKGGGASDEQGGSLAQTGDSESSCLNSHP
LQLEADSSSTSLNEAEMKQVKPDADGVAPVAVGHGSCLTLNDHDRIRQFVQEFTFRGLLP
HIEKNIRQLNDQLVSRKGLSRSLFTATKKWFGGGKAPEKSMSEPKSACGLLYPPEAPELQ
IRKMADLCFLVQHYELAYSCYHTAKKDFLSDQALLYAAGALEMAAVSAFLQGGGARPYPA
HYMDTAIQKYRDDCRNMVLAERCALLSAEILKNQGKYSEAATLLIKMTSEDSDLRSALLL
EQAAHCFINMRSPMVRKFAFHMILAGHRFSKAGQRKHALRCYSQAMQVYKDRGWSLAEDH
INFTIGRQSFTLGQPESAVTAFRQILNDDSRQTATQQAAFLREYLYVHKSVMGDQVKSLP
QLPLPCILSAATRVYFGHEPRLAQGEKQAATHVSLDQEYDPELSAMWSRLEEQVVAAANR
GVVPIGFQPTQCCLNSQTDNLRQPLAVLEEPIIVEVTFRNPLKVSLALSELSLLWRFSSH
LSSSSLREPASEQVTGEVISNEETLLTPNVQKAEVVTTEMIQEFHLSPEETRTARLKLLP
HRTGQLSIVGVTYNLSSSSFDTTEEPYTVDLVVRGRQDLNIQGPRLNQTKEDKMSVRHGT
DRRLDPIITPPMPLMEVFFLHFPSALLCGEIRKAYVEFCNVSAVALCGLRVASTHPHFFT
FGSNNPTPSTPTSPASAEHSSAYKTFAATVQPGSVVSEVEVCAQDFSQLSGVIEIPIDGG
TLHPGQSVQLPLWLRGPDHEGVHEINFLFYYESTEKGLKVSHRVLRHTVFICASRSLSVQ
ASACRSAAPPHRSSDSMSCDGTLVFVDVENVNTSEGGVREFHIVQVSSSSQRWRLHKYIN
PDKDKDCKLSSREKAKLCFRATPCTPLPASMDTVEKYTFADLNLGNEQIISSSTPCRDFF
FRCCRGLELQQGDKVLSRTGSSNKTASTPPNTGPSDPATIARKCNELDLTIIVIWKAFVV
EDSKQLILEGQLHVALQTIGKEATSLMPKEEAQEMVLLKFKSELPPPVALPPPELSQLIK
TNLHYPETFSHGFLQDSLCMVPVTLSLSNCCSAPIEVLIDLRHRSISSESQEFHSLFSWV
GQSQYKLLLRPHEVLSLALRACFFRAGVYNLNTARVFAKPAQLSSMSESNQQAASPALII
INST
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgcgttcagtccgtgcaggagttcctccaggactccttcgtcccgatggtt
gccgtcctgtgcagcaaagaggcggacagagtttcccgaaagaacaagctgagcttcccg
gagctgttgcggcctttctgcaggcttctctccgaaggtcacatcagggatcccaacaac
cagctgcagactgtgaaaaacctgcgcatctgtgtcaatgcggtgaatacaaacccagtt
tcatcacctgctgttcttagcccagcccagtaccggcagctcggggaggtggtgtcatcc
tgccagccactggagggggccgcagccaccacctttaaaactggagactacaacctgaac
ttgagtgttaccactccatggttcgaggcctacagggagagcttcctacagtccatgcct
gcttctgagcacgagttcctcaatcactatctagcctgtctgctggtggtgtcctccacc
gaggccgtccccgtggagcagttcctcaagctttcccaggagcagcacagaatccagcac
agtggagaatacactcaccccagatggttcatccccaacactctgaagtactacgtcctg
ctgcacgacgtgagcgagggcgatgaacagagggctgaaacggtttatgaggacatgaag
cagaggtatggccctcaagggtgctacctgcttaagatcaattcgcgtgctgtttccgcc
gaagaggacgaacagattccagatccctggagtcaatacctgcacaagaacaacctacgc
taccaggatccaggtgatgcagctccagctgctgagaaagggggcggtgcttctgacgaa
cagggtgggtccctcgcacaaacaggtgacagtgagtccagctgcctgaacagccatcct
ctgcagcttgaggcagacagcagctccacaagtctcaacgaggcagagatgaagcaagtg
aaacctgacgcggatggcgtggcgccggtggcagtggggcatggatcatgccttacgttg
aatgaccatgaccgtatcagacagtttgtccaggagttcaccttcaggggtctgctgcca
cacatcgagaagaacatcagacagcttaacgaccagctggtttccaggaaaggcctgagt
cgttccctttttaccgccaccaagaagtggtttggggggggtaaagctccagaaaagagc
atgagtgagcccaagagcgcctgcggcctcctgtatccccccgaggcgcctgagctgcag
atcaggaagatggcagatctgtgtttcctggtgcagcattacgagctggcctacagctgc
taccacaccgccaagaaggacttcctgtcagaccaggccctgctgtacgccgcgggagcg
ctggaaatggcagcagtttcagccttcctgcagggtgggggggcccgaccgtaccccgcc
cactacatggacactgcaatccagaagtacagagacgactgcaggaacatggttctggcc
gagcgctgcgctttactgagtgccgagatcctcaagaatcagggaaagtactctgaggct
gccacgctcctcatcaagatgaccagtgaggactcggacctgcgcagtgccctgctgctg
gagcaggccgcccactgtttcatcaacatgcgcagccccatggtgcggaagtttgccttc
cacatgatcctcgccggtcaccgcttcagcaaggcaggccagaggaaacatgcgctgcgg
tgttactctcaggccatgcaggtctataaggacagaggctggtctttagcagaagatcac
atcaatttcaccattggccgccagtccttcaccctcggccaaccagagagtgcagtgacg
gccttcaggcagatcctaaacgacgacagcaggcagacggccacgcagcaggcggctttc
ctccgagaatacctctatgtccacaagagcgtgatgggagatcaggtgaagagtcttccc
cagctcccgctgccatgcatcctcagtgctgccaccagggtctacttcggacacgaacct
cgcctcgctcaaggagagaagcaggcggccactcacgtgtctctggatcaggagtacgac
ccggagctgtcggccatgtggagccgtctggaggagcaggtcgtagctgctgctaaccga
ggcgtcgtgcccattggcttccagcccactcagtgctgcctgaacagccagacggacaac
ctgcggcagccactggccgtgctggaggagcccatcattgtggaagtgaccttcaggaac
cctctgaaggtctctctggctctgtctgaactctcactcctctggaggttcagttcccac
ctttcgtcctcgtccctaagagagccagcaagtgaacaggtgaccggagaggtcatcagc
aatgaagagaccctgctgactccaaatgtacaaaaggctgaggttgtcaccacagaaatg
atccaagagtttcatctgagtccagaagaaaccagaacggcacgcctgaagctgcttcca
catagaacaggtcagctaagcattgtgggagtgacttacaacctgagttcatcatcgttt
gacaccactgaagagccttacaccgtagacctggtggttcgtggcagacaggatctaaac
atccagggccccagactcaaccaaaccaaagaggacaagatgtctgtgcgccatggcacg
gatcgacgtctggaccccatcataactcctccgatgcccctcatggaggtgttcttcctg
cacttcccctccgctcttctgtgcggggagatccgcaaagcctacgtagagttctgcaac
gtcagcgccgttgctctgtgtggcctgcgggtggcgtccacacacccccatttcttcacc
tttggtagcaacaacccaacaccctcgacgccgaccagcccggcctcagcagaacacagc
tctgcctataaaacttttgctgctaccgtccaaccgggctcagtggtgtctgaggttgag
gtttgtgcacaggactttagccagctgagcggtgtgatagaaatcccaatagatggtggg
accctgcatccgggccagtccgttcagctgcctttatggctgcgaggacctgaccacgag
ggagtccatgagatcaacttcttgttctactatgagagcacagaaaaaggcctcaaagtc
agccaccgggtgttgcgccacacagtcttcatctgtgccagtcggtctctgagcgttcag
gcctcggcgtgtcgcagcgccgctccacctcatcggtcttcagacagtatgagctgtgat
ggaacgctcgtctttgtagacgtggagaacgtcaacacgagtgaaggaggcgtccgtgag
tttcacattgtccaggtgtccagcagcagtcagcgctggcgccttcataagtacatcaac
cccgacaaggacaaagactgtaagctgagcagcagagagaaagccaagctttgcttcaga
gccacgccatgcacccccctcccagcttccatggacactgtggagaaatacacatttgca
gatctgaatctgggaaatgagcagatcatcagctcctccaccccctgcagagacttcttc
tttcgctgctgccgaggcctagagcttcagcaaggggataaggtgttatccaggacgggc
tccagcaacaaaaccgcctctacgccccccaacaccggcccctcagatcctgcaactatt
gctaggaagtgcaatgaactggacctaaccattattgtcatctggaaggcctttgtggtg
gaggacagcaagcaactgatcctggagggccagcttcatgtggctctgcagaccatcggg
aaagaggccacgtctctgatgcccaaagaggaagctcaggagatggtgttgctcaagttc
aagtcagaactcccccctcctgtggccctgccccccccagagctgtcccagctcatcaag
accaacctgcactacccagaaaccttctcccatggctttctccaggacagtctctgcatg
gttccagtgaccttgagtttatccaactgctgctcagctcctattgaagttctgattgac
ttaagacacagaagcatcagctctgagtctcaggagttccacagcctgttttcctgggtg
ggccagagtcagtacaagctgctgctgcggccacacgaggtgctgagcctcgctctgcgg
gcctgcttcttccgagcgggagtctacaacttgaacacggcccgagtttttgctaagcca
gcccagctgagcagcatgagcgagtccaaccagcaagcagcaagtcctgctctgatcatc
atcaacagcacttga
DBGET
integrated database retrieval system
