Oryzias melastigma (Indian medaka): 112138258
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Entry
112138258 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112138258
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112138258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
112138258
NCBI-ProteinID:
XP_024116590
Ensembl:
ENSOMEG00000012649
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHNYCMKCIQGFWDGEEKIHNCPQCRKTFM
PRPVLVKNTMLAYIMEQMKKTGLQAAPADHCYAGPEDVSCDVCSGRKLKAIKSCLICLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVEEHE
GHKIVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEEI
FTQMINLIQKRSCDVMQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYVSLPPLSESTHSSSINVRPLRYFEEVTAAVSELRDKLQDILREEQTNISLTVT
HVDVLLPDPEPKSRAYFLKYSCQIRLDPNTAHRRLLLSEENRKVMFMIQSQSDSDHPDRF
ITKLQVLSRESLTGRCYWEVEWNGIVNVAVAYKNINRSGDKSRFGYNDKSWAMSCSPESF
SFYHNSIKTSISARGSSRIGVYLDHTAGVLSFYSVSESMTLLHRVQTTFTQPLHAGVWVG
HVVGVTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatcaagaaactttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacaactactgcatgaagtgtattcaa
ggattctgggatggagaggagaaaatccacaactgtcctcaatgtaggaagacttttatg
ccgagacctgttctggtaaaaaacaccatgttagcatatataatggagcagatgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatgtctgctctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtagaggaacatgag
ggacataaaatagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgaggagatc
tttactcagatgatcaatctcatccagaaaagaagttgtgatgtaatgcagcagatcaga
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacgtctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcagagctc
agagacaaactgcaggacattctgagagaggaacagacaaacatctcactgacagtcact
catgtggatgttttactaccagatccagaaccaaagagcagagcttacttcttaaaatat
tcatgtcaaatcagactggatccaaacacagcacacagacgactgttactgtcagaggag
aacagaaaggtgatgtttatgattcaatctcagtctgattctgatcatccagacagattt
atcacaaagttacaagtcctgagtagagagagtctgactggacgttgttactgggaggtt
gagtggaatggaatagttaatgtagcagtcgcgtacaagaacatcaacagatctggagac
aaaagtagatttggttataatgataaatcttgggcaatgagttgttctccagaaagtttc
tcattttaccacaacagcataaaaacctccatctcagctcgtggttcctccagaataggt
gtgtacctggatcacacagcaggtgttctgtccttctacagcgtctctgaaagcatgact
ctcctccacagagtccagaccacattcactcagccgctccatgctggagtgtgggtgggt
catgttgttggagtcacagcagagttctgtaaactcaaatag
DBGET
integrated database retrieval system
