Oryzias melastigma (Indian medaka): 112140014
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Entry
112140014 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112140014
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112140014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-RING_10
Prok-RING_4
zf-RING_11
RSS_P20
Gp58
Motif
Other DBs
NCBI-GeneID:
112140014
NCBI-ProteinID:
XP_024118681
LinkDB
All DBs
Position
Unknown
AA seq
551 aa
AA seq
DB search
MAQKGVDLDQESFRCSICLDLLKDPVTIPCGHSYCMKCIQGFWDKEEKIHNCPQCRKTFI
PTPVLMKNTMLADLVDQLKKTGLQAAPADHCYAGPEDVSCDVCSGRKLKAIQSCLFCLAS
YCEKHIQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTQMIHLIQKTSCDVKQQIRSQQQTEVSGVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYVSLPPLSESTHSSSINVRPLRYFEEVTAAVSELRDKLQELLREEWTNISATVT
NVDVLLPEPKTRADFLKYSCQITLDPNTAHRQLLLSENRKVKMMKKPQPYSDHPDRFTNY
FQVLSRESLTGRCYWEVEWRGDEVFLAVAYKKISKLGHDSKFGFNDKSWALYHSSDYGFT
FYSKSRETSISAPDSSRVGVYLDHRAGVLSFYSISKSMTLLHRVQTTFTQPLHAGVTLFN
TGTSAEFCKLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatcaagaatccttcagatgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctgggataaagaggagaaaatccacaactgtcctcagtgtaggaagaccttcata
ccgacgcctgtcttgatgaaaaacaccatgttagcagatttagtggatcagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatgtctgctctggaagaaaactgaaagccatccagtcctgtttgttctgtctggcctct
tactgtgagaaacacattcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggatgaacatcga
ggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaggaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactcagatgatccatctcatccagaagacaagctgtgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtggagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacgtctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcagagctc
agagacaaactgcaggaacttctgagagaggaatggacaaacatctcagcgacagtcact
aatgtggatgttttactacccgaaccaaagaccagagctgacttcttgaaatattcatgt
caaatcacactggatccaaacacagcacacagacaacttttactgtcagagaacagaaag
gtgaagatgatgaaaaaacctcagccgtattctgatcatccagacagatttactaattat
tttcaggttctgagtagagagagtctgactggacgttgttactgggaggtggagtggaga
ggagacgaagtttttctagcagtcgcatacaagaaaatcagtaaattgggacatgatagt
aaatttggttttaatgacaaatcttgggcattgtatcattcttcagactacggttttaca
ttttacagcaagagcagagaaacctccatctcagctcctgattcctccagagtaggagtg
tacctggatcacagagcaggtgttctgtccttctacagcatctctaaaagcatgactctc
ctccacagagtccagaccacattcactcagccgctccatgctggagtgacgttgttcaac
actggaacctcagcagagttctgtaaactcaaatag
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