Oryzias melastigma (Indian medaka): 112140166
Help
Entry
112140166 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112140166
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112140166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Prok-RING_4
zf-RING_6
zf-ANAPC11
zf-RING_4
Gp58
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112140166
NCBI-ProteinID:
XP_024118821
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MATNDLQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWEEEEKIHSCPQCRKTFRPRP
VLEKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVSCDVCSGRKLKAIKSCLICLASYCE
KHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCPVDEHRGHD
TVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQELEAINHSADQTVKDSEEIFTQ
MIRLIQKRSCDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDHSQF
LLNYPSLPPLSESTHSSSINVRPLRYFEEVTAAVSELTDKLKDILSEEWTNISLKVTHVD
VLLSESEPKTRADFLKYSCEISLDPNTAHRQLLLSEENRIVTKMVQPQSYSDHPDRFTDY
LQVLSRESLTGRCYWEVEWRGYFVHVAVAYKKISRSGDESRFGFNNISWTSEGSLFGFTF
YHDSIKTSISARVSSRIGVYLDHRAGVLSFYNVSESMTLLHRVQTTFTQPLHAGVRLGSL
LFSGASAEFCELK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaatgatctgcaagaaaccttcagctgttccatctgtctggatctgttgaag
gatccggtgactattccctgtggacacagctactgcatgaagtgtattcaaggattctgg
gaagaagaggagaaaatccacagctgtcctcagtgtaggaagaccttcagaccaagacct
gttctggagaaaaataccatgttggcagctttagtggagcagctgaagaaaactggactc
caagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgtgatgtctgc
tctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctcttactgtgag
aaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctggtggaaccc
tccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaagatgttctgt
cgtactgatcagaagtgtatctgttatctctgccctgtagatgaacatagaggacatgac
acagtctcagctgcagcagaaaggactgagaggcagagagatctggaggagagtcaacaa
caaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaacaggagctg
gaggccatcaatcactctgctgatcaaacagtgaaggacagtgaggagatcttcactcag
atgatccgtctcatccagaaaagaagctgtgatgtgaagcagcagatcagatcccagcag
caaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggagatcactgag
ctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcacagccagttt
ctgctcaactacccctcactgccaccactcagtgagtccacacactcatccagcatcaat
gtccgtcctctcagatactttgaggaggtgacagcagctgtgtcagagctcacagacaaa
ctgaaggacattctgagtgaggaatggacaaacatatcactgaaagttactcatgtggat
gttttactatcagaatcagaaccaaagaccagagctgacttcttaaaatattcatgtgaa
atctcactggatccaaacacagcacaccgacaactgttactgtcagaggagaacagaatt
gtaacaaagatggtccaacctcagtcttattctgatcatccagacagatttactgattat
cttcaggttctgagtagagagagtctgactggacgttgttactgggaggtggagtggaga
ggatactttgttcatgtagcagtcgcatacaagaaaatcagcagatctggagatgaaagt
agatttggttttaataacatatcttggacatcagaaggttctctatttggttttacattt
taccacgacagcataaaaacctccatctcagctcgtgtttcctccagaataggagtgtac
ctggatcacagagcaggtgttctgtccttctacaacgtctctgaaagcatgactctcctc
cacagagtccagaccacattcactcagccgcttcatgctggagtgaggttgggttctttg
ttgttttctggagcctcagcagagttctgtgaactcaaataa
DBGET
integrated database retrieval system
