Oryzias melastigma (Indian medaka): 112140168
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Entry
112140168 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112140168
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112140168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_10
zf-RING_5
U-box
zf-RING_11
Prok-RING_4
Glyco_transf_9
Gp58
DivIC
Motif
Other DBs
NCBI-GeneID:
112140168
NCBI-ProteinID:
XP_024118824
LinkDB
All DBs
Position
Unknown
AA seq
556 aa
AA seq
DB search
MATNDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDGEENICSCPQCSETFTPR
PVLGKNIMLAALVEQLKKTGLQAAPAADHCYAGPEDVSCDVCSGRKLKAIKSCLFCLASY
CEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHRG
HDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEEIF
TQMIRLIQKRSCDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDHS
QFLLNYPSLPPLSESTHSSSINVRPLRYFEDVTAAVSELRDKLQDILREERTNISPTVTH
VDVLLPEPESEPELKSRADFLKYSRQITLDPNTAHRQLLLSEGNRTVTKMVQPQSDSDHP
DRFIQCGQVLSRESLTGRCYLEVEWRGNFVHIAVAYKNISRSGNESICGFNDKSWALLCS
PDSFSFYHNRNETFISAPVSSRVGVYLDHRAGVLSFYSVSKSMTLLHRVQTTFTQPLHAG
LFLGFILDSAELCKLK
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaatgatctggatcaagaaaccttcagctgttccatctgtctggatctgttg
aaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaaggattc
tgggatggagaggaaaacatctgcagctgtcctcagtgtagtgagaccttcacaccaagg
cctgttctggggaaaaatatcatgttggcagctttagtggagcagctgaagaagactgga
ctccaagctgctcctgctgctgatcactgctatgctggacctgaagatgtgtcctgtgat
gtttgttctggaagaaaactcaaagccatcaagtcctgtttgttctgtctggcctcttac
tgtgagaaacaccttcagcctcatttggatgaagctgcattcaagaaacacaagctggtg
gaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaagatg
ttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggatgaacatagagga
cacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggagagt
caacaacaaatccagcagagaatccaggacagagaaaaagaggtgaagctgcttcaacag
gaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgaggagatcttc
actcagatgatccgtctcatccagaaaagaagctgtgatgtgaagcagcagatcagatcc
cagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggagatc
actgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcacagc
cagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatccagc
atcaatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctcaga
gacaaactgcaggacattctgagagaggaacggacaaacatctcaccgacagtcactcat
gtggatgttttactgccagaaccagaatcagaaccagaactaaagagcagagctgacttc
ttgaaatattcacgtcaaatcacactggatccaaacacagcacacagacaactgttacta
tcagaagggaaccgaacggtgacaaagatggtacaacctcagtctgattctgatcatcca
gacagatttattcaatgtggtcaggttctgagtagagagagtctgactggacgttgttac
ttggaggtagagtggagaggaaactttgttcatatagcagtcgcatacaagaacatcagt
agatctggaaatgaaagtatatgtggttttaatgacaaatcttgggcattactttgttct
ccagacagtttctcattttaccacaacagaaatgaaaccttcatctcagctcctgtttcc
tccagagtaggagtgtacctggatcacagagcaggtgttctgtccttctacagcgtctct
aaaagcatgactctcctccacagagtccagaccacattcactcagccgctccatgctgga
ctgtttttgggttttattttagactcagcagagttgtgtaaactcaaatag
DBGET
integrated database retrieval system
