Oryzias melastigma (Indian medaka): 112140612
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Entry
112140612 CDS
T07439
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
112140612 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oml03021
]
112140612 (gtf2b)
Transcription machinery [BR:
oml03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
112140612 (gtf2b)
Prokaryotic type
Archaeal type
TFB
112140612 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_N
Harpin
Motif
Other DBs
NCBI-GeneID:
112140612
NCBI-ProteinID:
XP_024119382
LinkDB
All DBs
Position
LG17:17836035..17840611
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AA seq
182 aa
AA seq
DB search
MASTSRGEALSLPRVTCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFSNE
KAQKDPSRVGDAQNPLLNGGDLTTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRAMLHAF
KEISTMADRINLPRNIVDRTNNLFKQVYEQKSLKGRANDAIASACLYIACRQEGVPRTFK
GP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgactagtcgtggagaagctctaagtctgcccagagtcacatgtcccaaccac
cccgatgccatcctggtggaggactaccgagcaggggacatgatttgccccgagtgtggt
cttgttgttggtgatcgggtcattgacgtgggttcagagtggagaaccttctccaacgag
aaagctcagaaagatccatccagagtgggagacgctcagaatcctttgctcaacggagga
gatctaactactatgatcgggaagggaacaggggctgccagctttgacgaatttgggaac
tccaagtatcagaaccggcgaaccatgagcagctcggaccgggccatgctccacgccttc
aaagagatcagcaccatggccgaccgcatcaaccttcccaggaatattgtagacagaacc
aacaacctattcaagcaggtttacgagcagaagagcctgaaggggcgagccaacgacgcc
atcgcgtccgcctgcctttacatcgcctgcagacaggaaggagtccccagaaccttcaaa
ggtccgtga
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