Oryzias melastigma (Indian medaka): 112142573
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Entry
112142573 CDS
T07439
Symbol
pom121
Name
(RefSeq) nuclear envelope pore membrane protein POM 121
KO
K14316
nuclear pore complex protein Nup121
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
112142573 (pom121)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oml03019
]
112142573 (pom121)
Messenger RNA biogenesis [BR:
oml03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
112142573 (pom121)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
112142573
NCBI-ProteinID:
XP_024121794
Ensembl:
ENSOMEG00000002678
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All DBs
Position
LG14:complement(24485158..24494922)
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AA seq
1165 aa
AA seq
DB search
MSPREKRIVLLSALGLFTLAFYFIPSLIYATLIIIFCCFACYYNSGESLLTARLGPNPRG
GLNLHAGLRRWLADWGTTGLSVNSPVGTRISSNAEAESQFRQRLGDTGIYRREALASESF
FYSPRDFLMGSYIGKHESPPSGSVRPRAGRNPREQLREKLSRPNHAVYTPNRRLSFAGEP
LAYTSRFNITPQRHYPLQQPGLSSVGVLPLVRWDGFRQKNILSPRNSPAALSPVTVKIAR
PDLSSPRVDHLSCSRISRTADDPCSRESVLRVLKESRKREVEDEDRSFTTEQKSKRRRND
SGGSAHSAFEPLLPNGAPSQLVPKPGTLKRGIASLAEESSVKRSRTSSISSGTGAHASRE
SSGTKRNAIQSSYSSSVGLNQWKKPSTPSSLLSSPGSSRCQTPDVAFKKPREEDAQSPSS
ASSAKSEQTTSDKAPATSKLTVVPNVPVTSVSDSVGSGGKRKRKIQLVSSNRDDHISLPP
PPELGYKVTAKDLDEEKKAAISKIQKVLETPAPEPEKPAAATIPTSTPAPSSTISTTTPT
LSSLLAAPLPTSSTTTTIPVINLDPSPSSSVSTSTTAAAAAASPNPLLEALKMKINTAAT
STSALSPTTVSLSTTPGPTLSLKSPAPSVPPASQPQPSSAPLGQPSAFTQVLAQISKAPS
SSSPAAPVVGPALFGLSSQISSPSAPSTSTPVSATPAPSSSSSNPLLVSGFKPIFAAATT
TTTPATSSSESKAPIQNFKPIFGEATATPAAPAFAAPSALTTTSSVSTLSAGSTPSIFGG
LTSSSTAAPSAFSGFNTTAANMVSTSAATTQPGAQMAPKSLFGSWSAAATTTSSSASASV
QPLTTGGTFQFGAAVTTTTSSAAASTGAPAATTTSQASFTFGVTKPNPQPASQSIFGFGQ
TTPNMTTTTASFGGFAMTSSTSTAAPTSTSTQSTFAFGKPAFEAPTTQPTFGSAAATAKP
FNFGSSSSNATPVSNNTLGPFAFGAAPAATTTATFGTQPAKPAFGASSTGFAFGSTTTPS
AAPSFGPATQTQSSTSTTFTFGGVAPQPAPAGPAQPASGGFNFGTAMPCPQFGAQVSNSP
APQMGGFNFGAAAADKPGFGTSTPSFGQSPAAGPIPFGSPGTPVQGFNPVSFGSPATPTF
SIGAGSKHSGSRQRLQARRQHLRKK
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcacctagagagaaacgaatagttcttctctctgctttaggcttatttacgctagct
ttttattttattccatccttaatttacgcaactttaattattattttttgttgttttgct
tgttactataatagcggagagtctcttttaaccgccagattaggccccaatccacggggt
gggttgaacctgcacgcgggtttgcggcgctggttggcggactggggaacgaccggcttg
tcggtgaattcgccggttggaacgaggattagcagcaacgctgaagcggaaagtcaattc
agacaaagactcggtgacactggaatttacagaagggaggctttggcgagtgaatctttt
ttctacagtccccgggatttcctcatggggagttacatcggaaagcacgagagtcccccc
tccggttccgtgaggccaagagccgggaggaacccccgagagcaactacgagagaagctg
tcgagaccaaaccatgcggtctacactcccaacagaaggctctcattcgctggagagcct
ctggcctacacgagcaggttcaacattactccacagcgtcactacccgctgcagcagcca
ggtctgtcatctgtgggggtcctgcctctcgtcaggtgggatggcttcagacagaaaaac
atcttgagcccccgtaattcacctgctgccctcagccctgtcaccgtaaaaatcgccagg
cctgatctcagcagccccagagtggatcacttgagctgttcaaggatcagcaggaccgcc
gatgacccctgctccagggagagcgtcctcagggttttgaaggaaagtcgtaagagggaa
gtcgaggacgaagacaggagcttcacaaccgaacagaaaagtaaaagaaggcgtaatgac
agtggtggaagtgcacactctgcttttgagcctcttctacccaacggagctccatctcag
cttgtacccaagccaggaaccctgaaaagaggtatagcctcattggcagaggagtcctca
gtaaagaggtctcgcacctcctccatcagctcgggaacaggagctcacgcctcaagagaa
agttctggtaccaagagaaatgcgatccagagctcctacagctcctcagttggcctcaat
cagtggaagaaaccatcaactcccagttctcttctctccagtcctggatcgtctcgctgt
cagacaccagatgtggctttcaagaaacccagagaggaagacgctcagtcccccagctca
gcttcctcagccaaatctgaacagacgacgtctgacaaagcaccagccacttcaaaactg
actgttgtcccaaatgtcccggttacgagcgtgtctgactctgtgggtagtggtgggaaa
agaaaacggaagatccagttggtttcgagcaaccgagacgaccacatctctctgcctcca
ccgcctgagctgggctacaaagtgactgcaaaagatctggacgaggagaaaaaagctgcc
atctctaagattcagaaggttctggaaactcctgccccagaacctgaaaagccagcagct
gctacaatcccaacttccactccagccccctcctctactatctccaccaccacacccact
ctgagcagccttctggctgctcctttacccacatcatcaacaacaacaaccatcccagtc
atcaacctggaccccagtccaagcagcagcgtcagcacatcaactactgcagcagcagca
gcagcgtctccaaacccacttctggaggctctaaagatgaagatcaacacagctgcaacc
tccacatccgcattgagtccaaccacagtgtctttatcaacaactcctggaccaacttta
agcctaaagtctccagctccatctgtccctcccgcttcccagcctcagccctcctctgct
cctctgggacaaccctctgccttcactcaggtcctggctcagatctccaaagctcccagc
agcagcagccctgctgctcctgttgttggaccagctctgtttggtttgtccagccagatc
agctccccctctgctccatcaacctccaccccagtgtctgctacacctgcccccagcagc
agcagcagcaaccctctgctggtttcaggcttcaaacccatctttgctgctgccaccacc
accaccaccccagctacatcatcctcagagagtaaagcacccatccagaatttcaagcct
atctttggggaggccacagctaccccggctgccccggcttttgcagcgccctccgccctc
acaaccacgtcatccgtgtccacactgtctgcagggagcactccttcaatatttggtggc
ttaaccagcagctccacggctgcaccgtctgctttttctggttttaacacgaccgctgca
aacatggtttccacatctgctgccacaactcagccgggagcccagatggctccaaaatct
ctctttggaagctggtctgcagcagcaacaacaacaagcagcagcgcttcagcttcagtg
cagcctctgactacagggggtacgttccagtttggggctgctgtcaccaccaccacctct
tcagcagcagcatcaaccggggcccccgctgccacgaccaccagccaggccagcttcaca
tttggtgtcacaaagcccaaccctcaacctgccagccagagcatatttggttttggtcag
acgactcctaacatgaccacaaccacggcttcatttggaggctttgccatgaccagctcc
acctccacggctgctcccacctccacgtccacgcagtccacttttgcgtttggaaagcca
gcttttgaggccccaacaacacagccgacctttggctccgcagcagccacagctaaaccg
ttcaattttgggagcagcagttcaaacgccacgcccgtctccaacaacaccctgggtccg
tttgcctttggagcagctcccgccgccaccaccacagccacgtttgggacccaacccgct
aaaccagcatttggagccagctccacgggtttcgccttcgggagcaccaccactccttca
gctgcacccagcttcggcccagcgacccaaactcagagctcaacttcaaccaccttcacc
tttggaggggttgcccctcagcctgccccggcgggacccgctcagcccgcttctggtgga
tttaattttggtaccgcaatgccttgtccccagtttggagctcaagtttctaacagtccg
gccccgcagatgggaggtttcaactttggagctgctgccgctgacaaaccaggatttgga
acatccactccgtcatttggccaatctcctgctgctggtccaattccctttggaagtcca
ggaactccagtccaaggcttcaatcctgtttcgtttggatccccagcaacccccaccttc
tccatcggagctggatccaagcattcaggatctcggcagaggcttcaggcccggagacaa
cacctcaggaagaagtag
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integrated database retrieval system
