Oryzias melastigma (Indian medaka): 112143468
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Entry
112143468 CDS
T07439
Name
(RefSeq) CSC1-like protein 2 isoform X3
KO
K21989
calcium permeable stress-gated cation channel
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
oml02000
]
112143468
Transporters [BR:
oml02000
]
Other transporters
Pores ion channels [TC:
1
]
112143468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSN1_7TM
PHM7_cyt
RSN1_TM
Ribonuc_L-PSP
Motif
Other DBs
NCBI-GeneID:
112143468
NCBI-ProteinID:
XP_024123233
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Position
LG16:18108222..18128652
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AA seq
846 aa
AA seq
DB search
MLVVVVTMAILGSSQACSGQENCSADSESKEYCYSARIRSTVLQGLPFGGVPTVLALDFM
CFLVLLFVFSILRKVAWDYGRLALVTDADRMTKRFSDLEEQEYVASAMHSETPDRYERLT
SVSSSVDFEQRDNGFCSWLTAIFRIKDEEIREKCGEDAVHYLSFQRHIIGLLVVVGVLSV
GIVLPINFSGDLLENNAYSFGRTTIANLKSGTNLLWLHTTFAFMYLLLTVYSMRRHTSKM
HYKEDDLVKRTLFINGISKYAEESQIKQHFEQAYENCVVLEARICYNVAKLMALNAERKK
TERSKKFFTDLMAKEHVPTMINPKPCGHLCCCAITGCEEEEAVSYYTKMEAKLKEEYRKE
KEKVHTKPLGMAFVTFQNEAMTAIILKDFNACQVQGCRCRQEPRSSQFSDVLHVHNWSVL
YAPDPQNVRWEHLSLGGISWWIRCFIINCILFILLFFLTTPAIIISTMDKFNVTKPVEYL
NNPIVTQFFPTLLLWAFSALLPTIVYYSAFFEAHWTRSGENRTTMHKCYTFLIFMVLLLP
SLGLSSLDVFFRWLFDKKFLADAKVRFECVFLPDNGAFFVNYVIASAFIGNAMDLLRIPG
LLMYMIRLCLARSAADRRNVKRHQAYEFQFGAAYAWMMNVFTVVMAYSITCPIIVPFGLM
YMLLKHLVDRYNMYYAYLPSKLDKKIHSGAVTQVVAAPILCLFWLLFFSTVRTGFETPTS
MFTLVVLIVTIVVCLSHVCFGHFKYLSAHNYKIDTKENDLEAVENGRPARPSSSSVSKSQ
QKQAQQQQMYIAQVLQDPTSDEAGGGSSEEDRGSSQDEEMLNGGNSINEADFQSGEDSLI
ANEVHQ
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtggtcgtggttaccatggcgattctcggtagcagccaggcctgcagcggtcag
gagaactgctcggccgacagcgagtccaaggagtactgctactcggcccggatccgcagc
acggtgctgcaggggctgccgtttgggggcgtgcccaccgtgctggcgctcgacttcatg
tgcttcctggtgctgctcttcgtcttctccatcctgcggaaggtggcgtgggattacggc
cgactggcgctggttacagacgcagacagaatgaccaagcgtttcagcgacctggaggag
caggaatacgttgcgtctgcgatgcactcggagacgcccgatcgctacgaacggctcacc
tctgtgtccagctccgtggactttgaacagcgggacaatggtttctgctcgtggctcacg
gccattttcagaataaaagacgaggagatcagggagaagtgtggcgaggacgccgtacac
tacctgtccttccagcgccacatcatcggcctgctggtggtggttggcgtcctgtccgtc
ggcatcgtcttgcccatcaacttctctggagatctgctggaaaacaacgcctacagcttc
ggacgcaccaccatagccaacctcaaatctgggacaaacctgctgtggctccacaccacg
tttgcgttcatgtacctgctgctgaccgtctacagtatgaggagacacacgtccaagatg
cactacaaggaggacgacctggtgaaacgcactttattcattaacggcatctctaagtat
gctgaggagagtcagatcaagcagcactttgagcaggcctacgagaactgcgtggtcctg
gaggctcggatctgctacaacgtggccaagctgatggctctgaacgctgagaggaagaag
acggagcgcagcaagaagttcttcaccgacctgatggccaaggagcacgtccccaccatg
atcaaccccaaaccctgcggacacctctgctgctgcgccatcaccggctgcgaggaggag
gaggcggtcagctactacaccaagatggaggcaaagctgaaggaggaatacaggaaggag
aaggaaaaggtccacaccaaacctctgggcatggccttcgtcaccttccagaacgaggcc
atgaccgccataatcctgaaggactttaacgcctgccaggtgcagggctgccgctgtcgt
caggagccccgctcttctcagttcagtgacgtcctccacgtccataactggagcgttctg
tatgcgcccgaccctcagaacgtccgctgggagcacctgtcgctgggcggtatttcctgg
tggatccgctgcttcatcatcaactgcatcctcttcatcttactcttcttcctcaccact
cccgccatcatcatctccaccatggacaagttcaacgtcaccaagcccgtggagtacctg
aacaaccccatcgtcacgcagttcttcccgaccctgctgctctgggccttctccgccttg
ctgcccaccatcgtctactactccgccttcttcgaggcccactggaccaggtcaggagag
aacagaaccaccatgcacaaatgctacaccttcctgatcttcatggttctgctgctaccg
tcactgggactcagcagtctggacgtcttcttccgctggttgtttgataagaagttcctg
gcagacgccaaagtccggtttgagtgcgtcttccttccggataacggagctttctttgtg
aactacgtcattgcctcggcctttatcgggaacgccatggatctgctgaggattcctggt
cttctgatgtacatgatccggctgtgcctggctcgctccgccgctgaccgccgtaacgtg
aagaggcatcaggcctacgagttccagttcggcgccgcctacgcctggatgatgaacgtc
ttcacggtggtgatggcctacagcatcacctgccccatcattgtcccttttggtctgatg
tacatgctgctcaaacacctggtggacaggtacaacatgtactacgcgtacctgccctcc
aaactggacaagaagatccactctggcgccgtcacccaggtggttgcggcgcccatcctc
tgcctcttctggctgctcttcttctccactgtgcgcacaggttttgagacgccgacctcc
atgttcaccctggtggtgctgatcgtcaccatagtggtctgcctgtcccacgtctgcttc
ggacacttcaagtacctgagcgctcacaactacaagatcgacactaaagagaacgacctg
gaggctgtggaaaacggacgccctgctcggccctcctcctcctccgtcagcaagtctcag
cagaagcaggcgcagcagcagcagatgtacatcgcacaggtgctccaggaccccacctca
gacgaggctggcggcggcagcagcgaggaggaccgcggctcgtcgcaggacgaggagatg
ctgaacggcggcaacagcatcaacgaggcggacttccagtcgggggaagacagtctgatc
gccaacgaggtccatcagtag
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