Oryzias melastigma (Indian medaka): 112144265
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Entry
112144265 CDS
T07439
Name
(RefSeq) WD repeat-containing protein 78 isoform X1
KO
K24723
dynein axonemal intermediate chain 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
112144265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oml03037
]
112144265
04812 Cytoskeleton proteins [BR:
oml04812
]
112144265
Cilium and associated proteins [BR:
oml03037
]
Motile cilia and associated proteins
Dynein arm
112144265
Cytoskeleton proteins [BR:
oml04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
112144265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Motif
Other DBs
NCBI-GeneID:
112144265
NCBI-ProteinID:
XP_024124484
Ensembl:
ENSOMEG00000003342
LinkDB
All DBs
Position
LG17:complement(12432383..12444049)
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AA seq
762 aa
AA seq
DB search
MSASTEREGPSLTRTVVRRPFRRHGLHSSFQPNSRLGSSSRRSFSLEGGSKVLQKSIIQS
PKAAVRVLDEECNDVTPLPLCQANPGAAQATASILFKDGISADSASDQTTATESFSVPLS
RSFLDSSRISSQSSLWFMNEEMEETSSKWNVSNSFPDDRSKTEALREEVELTLKETKDLF
LTETDNISLLDIPSTFLLLDADHPEASKKTRRKDQYVDRSSQTFHGAPKNKHVQSDGLLL
VDAGVAVSTSIMYDDAELEERPDKPEAVNYAGASVDSDDRGSLVSPVRSAERSTSAGSMA
TAVSVSSSLKDAEVSENTPKSDVELIGLSKKFLHSLLVVEKTILQSLLQPQLAVYRQLPS
LKDYIVEVDREEQRDAEISENPALEGLWVFSCELTRGFSVSSMAWNKKNLDLLAVGYGEF
DSTDQRPGLVCCWSLKNPMWPERVVHCDSAVTSLDFSAARPSHLAVGTFDGSIAIYDIQN
PDSTSLFLDTSKCPSRHLGPVWQLRWNQQELGLPAEERLEDLISVGADGRIIKWFVCTGS
LGHTELMKLKRTSYKTPDAKNTGGVSQSVLSSLIPALCLDFHPTEPGIYLTGTWEGLIHK
CSCSNNQQYLDTYRKHYCAVNYVAWCPLSRDVFLSCSADCTIQLWTQNQHNPMLSFSTTR
KVVHDIKWSSKWATVFAAVYDEQLEIWDLDLSCLNPVIVQPAPPGVRLASLLFASHTDCV
VVGDSCGQVTVYHLRNLGVGGSNQVNILHDLLHSAASSTLKP
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcatcgacggagagagaagggcccagcctgacgcggactgtggtgcggaggccc
ttccgccgtcacggactccacagctccttccagccgaacagcaggctcggttcgtccagc
aggcgcagcttcagcctggaaggaggcagcaaagttctgcaaaagagcatcattcagagc
ccaaaagcagctgttcgggttttggacgaggagtgcaacgatgtcaccccactgccactg
tgtcaggcaaaccctggggcggcacaggccacggccagcatcctcttcaaggacgggatt
tctgccgactcagcatcagaccaaactacggccactgagagctttagcgtgcctctctcc
aggtcatttctggatagcagcagaatatccagccaatcttcactttggttcatgaatgaa
gagatggaagagacttcttccaaatggaacgtttccaacagcttcccagacgacagaagc
aaaacagaggccctgagagaagaagtggagcttactctcaaagagactaaagacctcttt
ctgaccgagacggacaacatttctctgcttgacattccttcaactttcctcttgctggat
gctgatcatccagaagcttcaaagaaaactagacgcaaagaccagtatgtggacagatcc
tcacagacattccatggagctcccaaaaacaaacacgttcagagtgatggtctgctcctg
gtggacgcaggcgtagctgtttccacctccatcatgtatgatgacgctgagctggaggag
aggccggataaacctgaagccgtgaactatgcaggagcttcagtggactctgatgacaga
ggctccctggtttcaccagtgagaagtgcagagaggagcacgtcagccggcagcatggcc
actgcagtcagtgtgtccagctcactgaaagacgcagaagtatctgaaaacactcccaaa
tcagacgtggagctcatcgggctttcaaagaaattcctgcacagtctgctggtggtggag
aagaccatcctgcagagcctgctgcagcctcagctggctgtttacagacagctgccctca
ctgaaagactacattgtggaggttgacagagaggagcagagagatgcagagatctctgaa
aaccccgccctggagggtctgtgggttttcagctgtgagctcaccagaggattcagtgtc
agcagcatggcctggaataagaagaacttggacctccttgctgtgggctatggggagttt
gactctactgatcaaagaccaggtctggtgtgctgctggtccctcaaaaaccccatgtgg
cccgagcgtgttgtgcactgtgacagcgccgtgacctctttggatttctcagccgctcgg
cccagtcacctggcagtggggacattcgacggcagcatagccatctacgacatccagaac
ccagacagcacttcacttttcctcgacaccagtaaatgtcccagcagacacctggggccg
gtgtggcagctcaggtggaaccaacaagagctgggattaccagcagaggagaggttggag
gatctcatctctgtgggggcagatggaaggatcatcaagtggtttgtttgcactgggagc
ctcggacacacagagctgatgaagctcaaaaggacgagttacaaaacgccagacgcaaaa
aacacaggaggagtttcacaaagtgttttatcttcactgattcctgctttgtgtttggac
tttcatccaacagagcccggtatctacctgaccggtacgtgggaaggtctcatccacaag
tgttcctgttccaacaaccagcagtatctggatacatacagaaaacattattgtgccgtg
aactatgtcgcgtggtgtcctctcagccgtgacgtattcctaagctgctctgctgactgc
accatccagctgtggacgcagaaccaacacaaccccatgctgagcttcagcaccaccagg
aaggtcgtgcacgacatcaagtggtcctcaaagtgggcaacagtctttgctgcagtttat
gatgagcagcttgaaatctgggaccttgatttaagctgtctgaatccagtcattgtgcag
ccggctcctcccggtgtgagactggcatccctgctttttgcttcacacacagactgtgtt
gtggtaggagacagttgtgggcaggtgacggtctaccacctgaggaacctgggggttgga
ggaagcaaccaggtaaatatcctgcacgaccttcttcactctgcagcttctagtacacta
aagccatga
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