Oryzias melastigma (Indian medaka): 112144293
Help
Entry
112144293 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112144293
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112144293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
Baculo_IE-1
zf-ANAPC11
DivIC
Motif
Other DBs
NCBI-GeneID:
112144293
NCBI-ProteinID:
XP_024124545
LinkDB
All DBs
Position
LG17:complement(13129552..13131305)
Genome browser
AA seq
554 aa
AA seq
DB search
MATNDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDGEEKIPRCPQCRKTFTMR
PVLVKNTMLAALVEQLKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLVCLVSYC
EKHLQPHLDVAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVEEHRGH
DTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKIFT
QMIRLIQKRSFDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDHSQ
FLLNYPSLPPLSESTHSSSINVRPLRYFEEVTATVSELRDKLQEILREQWTNISLTVTRV
DVLLPEPEPEPKNRADFLKYSCQITLYPNTAHRELLLSQENRKVTFMEKLQSDSDHPDRF
TDFFQVLSRESLTGHCYWEVEWRGKYVYVAVAYKNISRSGDGSIFGFNDKSWALRCYPDS
FSFYHNNIKTSISAPGSSRVGVYLDHRAGVLSFYSVSESMTLLHRVQTTFTQKLHAGVLL
DYPVGTSAELCKLK
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atggccacaaatgatctggatcaagaaaccttcagctgttccatctgtctggatctgctg
aaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaaggattc
tgggatggagaggagaaaatccccagatgtcctcagtgtaggaagaccttcacaatgaga
cctgttctggtgaaaaacaccatgttagctgctttagtggagcagctgaagaagactgga
ctccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgtgatttc
tgctctggaagaaaactgaaagccatcaagtcttgtttggtctgtctggtctcttactgt
gagaaacaccttcaacctcatttggatgttgctgcattcaagaaacacaagctggtggaa
ccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaagatgttc
tgtcgtactgatcagaagtgtatctgttatctctgctctgtggaagaacatagaggacac
gacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggagagtcaa
caacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaacaggag
gtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatcttcact
cagatgatccgtctcatccagaaaagaagctttgatgtgaagcagcagatcagatcccag
cagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggagatcact
gagctgaaaaggagagacgctgagctgaagcagctctcactcacagaggatcacagccag
tttctgctcaactacccctcactgccaccactcagtgagtccacacactcatccagcatc
aatgtccgtcctctgagatactttgaggaggtgacagcaactgtgtcagagctcagagac
aaactgcaggagattctgagagagcaatggacaaacatctcactgacagtcactcgtgtg
gatgttttactgccagaaccagaaccagaaccaaagaacagagctgacttcttgaaatat
tcatgtcaaattacactatatccaaacacagcacacagagaactgttactgtcacaggag
aacagaaaggtgacatttatggaaaaacttcagtctgattctgatcatccagacagattt
actgatttttttcaggttctgagtagagagagtttgactggacattgttactgggaggtg
gagtggagaggaaaatatgtttatgtagcagtcgcctacaagaacatcagcagatctgga
gatggaagtatatttggtttcaatgataaatcttgggcattacgttgttatccagacagt
ttctcattttaccacaacaacataaaaacctcaatctcagctcctggttcctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacagtgtctctgaaagcatg
actctcctccacagagtccagaccacattcactcagaagcttcatgctggagtgttgctg
gattatcctgttggaacctcagcagagttgtgtaaactcaaatag
DBGET
integrated database retrieval system
