Oryzias melastigma (Indian medaka): 112144294
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Entry
112144294 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112144294
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112144294
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
SPRY
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
ToxN_toxin
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112144294
NCBI-ProteinID:
XP_024124546
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Position
LG17:complement(14932233..14955992)
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AA seq
547 aa
AA seq
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MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWDEEEKIHSCPQCRKTFM
PRPVLVKNVMFAALVDQLKKTGLQAAPADHCYAGPEDVSCDVCSGRKLKAIKSCLICLAS
YCKKHLEPHLDEAAFKKHKLEEPSKNLQEKICSIHRDEVMKMFCRTDQKCICYLCPVDEH
RGHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEK
IFTQMINLIQKRSCDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTED
HSQFLLNYLSLPPLSESTHSSSINVRPLTYFEEVTAAVSKLRDKLKELLREEWTNMDVSM
PEPEPKTRADFLKYACHITVDPNTAHRQLLLSEENRKAIKTEQLQSDSDHPDSFTEFLQV
LSKESLTGRCYWEVEKTDYIVDVAVAYKNISRSGDESGFGFNDKSWALICYPDCSLFYHN
SIKTSISAPVSSRVGVYLDHRAGVLSFYNVSESMTLLHRVQTTFTQPLHAGLRFYSVGVS
AEFCKLK
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatcaagaaaccttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctgggatgaagaggagaaaatccacagttgtcctcagtgtaggaagaccttcatg
ccgagacctgttctggtgaaaaatgttatgtttgcagctttagtggatcagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatgtctgctctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgcaagaaacaccttgaacctcatttggatgaagctgcattcaagaaacacaagttg
gaggaaccctccaagaacctgcaggagaagatttgctccattcatcgtgatgaggtgatg
aagatgttctgtcgtactgatcagaagtgtatctgttatctctgccctgtggatgaacat
agaggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggag
gagagtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgctt
caacaggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaag
atcttcactcagatgatcaatctcatccagaaaagaagctgtgatgtgaagcagcagatc
agatcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcag
gagatcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggat
cacagccagtttctgctcaactacctctcactgccaccactcagtgagtccacacactca
tccagcatcaatgtccgtcctctgacatactttgaggaggtgacagcagctgtgtcaaag
ctcagagacaaactgaaggaacttctgagagaggaatggacaaacatggatgtttcaatg
ccagaaccagaaccaaagaccagagctgacttcctaaaatatgcatgtcatataacagtg
gatccaaacacagcacacagacaactgttactgtcagaggagaacagaaaggcgataaag
acggaacaacttcagtctgactctgatcatccagacagttttactgaatttcttcaagtt
ctaagtaaagagagtctgactggacgttgttactgggaggtggaaaagactgattacatt
gttgatgtagcagtcgcatacaaaaacatcagtagatctggagatgaaagtgggtttggt
tttaatgacaaatcttgggcattaatttgttatccagactgttctctattttaccacaac
agcataaaaacctccatctcagctcctgtttcctccagagtaggagtgtacctggatcac
agagcaggtgttctgtccttctacaacgtctctgaaagcatgactctcctccacagagtc
cagaccacattcactcagccgctccatgctggactgaggttttattctgttggagtctca
gcagagttctgtaaactcaaatag
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