Oryzias melastigma (Indian medaka): 112144301
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Entry
112144301 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112144301
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112144301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
SPRY
zf-C3HC4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_10
Prok-RING_4
Exonuc_VII_L
zf-RING_6
Baculo_IE-1
DivIC
Gp58
V_ATPase_I
DUF5713
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112144301
NCBI-ProteinID:
XP_024124552
LinkDB
All DBs
Position
LG17:complement(14964965..14966840)
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AA seq
550 aa
AA seq
DB search
MAQKGVDLDQETFSCSICLDLLKDPVTIPCGHSYCMKCIQGFWHGKEKIHSCPQCRKTFK
PRPVLVKNFMFAALVDQLKKTGVQAAPADHCYAGPEDVSCDVCSGRKLKAIKSCLICLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHYADQTVKDSEKI
FTQMINLIQKRSHDVKQQIRSQQQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTPSSSINVRPLRYFEEVTAAVSELRDKLKDILREERTNISATVT
YVVVLLPEPKSRADFLKYSCEISLDPNTAHRQLLLSENRKVTMIKQPQPYSDHPDRFTDY
LQVLSRESLTGRCYWEVEWREDYICVAVAYKNISRSGDESEFGFNDRSWRLDCSPDSLSF
YHKRINTSISARVSSRVGVYLDHRAGVLSFYRVSKSMTLLHRVQTTFTQPLHAGLRLGWF
EISAEFCKLK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagtcgatctggatcaagaaaccttcagctgttccatctgtctggat
ctgctgaaggatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctggcacggaaaggagaaaatccacagctgtcctcaatgtaggaagaccttcaaa
ccgagacctgttctggtaaaaaattttatgtttgcagctttagtggatcagctgaagaag
actggagtccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatgtctgctctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgcactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactatgctgatcaaacagtgaaggacagtgagaagatc
ttcactcagatgatcaatctcatccagaaaagaagccatgatgtgaagcagcagatcaga
tcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacaccctcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcagagctc
agagacaaactgaaggacattctgagagaggaacggacaaacatctcagcgacagtcact
tatgtggttgttttactaccagaaccaaagagcagagctgacttcctaaaatattcatgt
gaaatctcactggatccaaatacagcacacagacaactgttactgtcagagaacagaaag
gtgacgatgataaaacaaccacagccgtattctgatcatccagacagatttactgattat
cttcaggttctgagtagagagagtctgactggacgttgttactgggaggtggagtggaga
gaagactatatttgtgtagcagttgcatacaagaacatcagtagatctggagatgaaagt
gaatttggttttaatgacagatcttggcgattagattgttctccagacagtttgtcattt
taccacaaaagaataaatacctccatctccgctcgtgtttcctccagagtaggagtgtac
ctggatcacagagcaggtgttctgtccttctacagagtctctaaaagcatgactctcctc
cacagagtccagaccacattcactcagccgctccatgctggactgaggttgggttggttt
gaaatctcagcagagttctgtaaactcaaatag
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