Oryzias melastigma (Indian medaka): 112145130
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Entry
112145130 CDS
T07439
Symbol
pcif1
Name
(RefSeq) mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase
KO
K17584
phosphorylated CTD-interacting factor 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oml01009
]
112145130 (pcif1)
Protein phosphatases and associated proteins [BR:
oml01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
112145130 (pcif1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PCIF1_WW
WW
Motif
Other DBs
NCBI-GeneID:
112145130
NCBI-ProteinID:
XP_024125958
Ensembl:
ENSOMEG00000002120
LinkDB
All DBs
Position
LG5:complement(16203304..16216788)
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AA seq
742 aa
AA seq
DB search
MSSESQGLVKGEAAAVLPPSASASTQGPPLSPSTPSRAPELPDELVQAGWAKCWSRRENR
PYYFNRFTNQSLWEVPVLGQHDVISDPLGLNAAPAEGGESNLGNGQRKRRSSEEQGAGPN
TLKRAKVEPTTPISPSTPGGKPWSSAPEDKPAQTNTPSTPTPTPAAPTPTPTPTPAPYRP
SVIYWDLDIQTNAVIRERAPASELPPHPEIELQRAQLVTKLRQHYHELCHQREGIDPPRE
SFNRWLLERKVIDKGHDPLLPSDCEPIISPSMFREVMNDIPIRLSRIKYKEEARKLLFKY
AEAAKRMIDSRNASPESRKVVKWNAEDTMNWLRRDHSASKEDYMDRLEHLRQQCGPHVTA
VAKDSVEGICSKIYQLSAEYSRRLRETHMSLLQDPATEVPESPQPSRLVYCYPVRLAIPT
PTLPRVELHFENDVACLRFRGEMVKVNRGHFSKLELLYRYSCIDDPRFEKFLSRVWCLLK
RYQVMFGSSNNEGTGLQGALPVSVFEALNRQFGVSFECFASPLNCYFKQYCSAFPDIDGF
FGSRGPFLTFSPVSGSFEANPPFCEELMDTMVTHFVELLEQSSEPLSFIVFIPEWRDPVT
PALSRMEESRFLRHQLSVPAYEHEYRSGSQHVCKREDMYYRAVHGTAVLFLQNDAGFAKW
APTPERLAELTAAYRPSLSRTSSLSSPGPAHISPGDRDSAHKAGDRTQSSVMSPSDHDNN
NNNGSTSSSPQDKLAVAEGRSL
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgaaagtcagggattggtgaaaggggaggcggctgcagtgttgcctccctct
gcttctgcctccacacagggaccacctctttctccttccaccccgtcaagagcacccgag
cttccagatgagctggtgcaggctggatgggccaagtgctggtctcgaagggagaaccgg
ccgtactacttcaacagattcaccaaccagagcctgtgggaagtgcctgtactgggtcaa
catgatgttatctcggatcctttaggtctgaatgcagccccggcagaaggtggagaaagt
aaccttggaaacggtcagaggaagaggaggagttctgaagagcagggggcgggtcctaac
actttaaaacgtgccaaggtggaacctaccacaccaatctcacccagcacgcctggaggc
aaaccctggagttctgcccctgaagacaaaccggcacagactaacaccccctcaactcca
actccaactccagcagctcctactcctactccaactccaactcccgccccatacagaccc
tctgtgatctactgggatctggatatacagacgaacgctgtgatcagagagcgagctcct
gccagcgagctgccaccccacccagagatcgagctgcagagagcacaactggtcaccaag
ctgaggcagcattaccatgagctgtgccaccagagagaaggcattgacccaccgcgggag
tcattcaaccgttggttgttggagaggaaagtcattgataaaggccatgacccactgctg
ccgagtgactgtgagccaatcatctctccatccatgttcagggaggtgatgaacgacatc
cccatcaggctgtctcgcatcaagtacaaagaggaggcgcggaaactgttgtttaaatac
gcagaagctgccaagaggatgattgactccaggaacgcaagtcccgagagcaggaaggtg
gtgaagtggaacgctgaagacaccatgaactggcttcgcagagatcattctgctagcaaa
gaagactacatggaccgtttggaacacctgcggcagcagtgtggtccacatgtcactgcg
gtagcaaaagactctgttgagggtatttgttccaagatctaccagctgtctgcagagtac
agccggcgcctgagggagacacacatgagtctgctgcaggacccggccacagaggtgcct
gaatccccacagccatcgcggctggtctactgttatccagtgcggctggccataccaaca
cccacccttccccgtgtggagctgcactttgagaacgatgtagcgtgtttacgtttcaga
ggcgagatggtcaaagtaaaccgaggacactttagcaagctggagctgttatacagatac
agctgtatagatgacccccgctttgaaaagttcttgtccagagtgtggtgcctcctcaag
agataccaggtgatgtttggcagcagcaacaacgaggggactggtctgcagggggcactg
ccggtgtctgtatttgaggcgttaaaccgccagtttggcgtttccttcgagtgttttgct
tcacctttgaactgttacttcaaacagtactgctctgcctttccggacatcgacggcttc
tttggatccagagggcccttcctgacattcagtcctgtcagtggttcatttgaagcaaac
ccgcccttctgtgaggagctcatggacaccatggtgacgcactttgtggaactgttggag
caatcctcagaaccgctgtccttcatcgtttttatcccggaatggcgtgaccctgtgacc
cctgctctatctcgcatggaggaaagccggttcctgcgacatcagctaagcgtcccggcc
tacgagcacgagtatcgatctgggagtcagcacgtctgcaagagagaagacatgtactac
cgggccgtccacggaactgcagtactcttcctacagaacgacgcaggatttgccaaatgg
gcaccaacaccagagcgtctagcggagctgactgcggcgtatcggccttccctgtcccgc
acttcctccctgtcctcccctggccccgcccacatctccccaggagacagagattctgcc
cacaaggccggtgacaggacacagagcagcgtgatgtcccccagtgaccatgacaacaac
aacaacaatggcagcaccagcagcagtcctcaagacaagctcgctgtggcagaggggcgg
agcttgtag
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