Oryzias melastigma (Indian medaka): 112146211
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Entry
112146211 CDS
T07439
Symbol
setd1a
Name
(RefSeq) histone-lysine N-methyltransferase SETD1A
KO
K11422
[histone H3]-lysine4 N-trimethyltransferase SETD1 [EC:
2.1.1.354
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00310
Lysine degradation
oml01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
112146211 (setd1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112146211 (setd1a)
Enzymes [BR:
oml01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
112146211 (setd1a)
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
112146211 (setd1a)
HMT complexes
COMPASS/SET1 complex
112146211 (setd1a)
COMPASS/SET1 complex (yeast)
112146211 (setd1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N-SET
SET
RRM_1
Motif
Other DBs
NCBI-GeneID:
112146211
NCBI-ProteinID:
XP_024127657
Ensembl:
ENSOMEG00000019732
LinkDB
All DBs
Position
LG8:complement(3536111..3566830)
Genome browser
AA seq
2179 aa
AA seq
DB search
MDPDSGTESQKAVSLQWKSYKLVQDPAIRRVTQKIYRYDGVHFSVPDSGFPPVGDLRDPR
PRRLWSRYSELSLPVPKFKLDEFFVGPIPLKEVTFARLNDNIKEPFLAEMCSKFGEVEEM
EILFHPKTRKHLGLARVLFTSTRGAKDTVKHLHNTSVMGTIIHVQLDIKGQQRQKYYDLI
VNGSYTPQTVPLGGKALTDKVQPQPPTQPQPDTPSEMRRRLSSELVALAAGVQALTSGGV
TPCSNDTGYSEPRMETTPSSLVGQFTPSSSASSQGGGGTPYSSRSGTPFSQDSGFTSTRH
SSYSTSNVSSGYPHQDMIPSSSSAVSSTVGGYKVSRYPDDLQDPSVYHRGRPVYPHPTSF
RPNEPPCYPPFTGVGGPGPHMAHHSSMPPPPMSNQFDPPPMSDRERERDSAGRYGAAGIG
SRRSSYHHQQDANSSSKYHAHHSHHSERRDERAYRRDSQGSRSGEHNHQRHRNHHHTHNH
HGSSSRRRSSHDRDRDRDRDRDADYPNNSDPRYSSNSYRSSSNSMSPPPSSYSAYASKEP
ASAPPQGSDAATRPGGANASERVSLPPAGADHPAHHSALPPPPPPPPPLPPASVIAAAVA
ETLGTLDFNQDSPVRGDTWTKPKRRPSTPPAPPKTPPPSSPTQPSVASSSNSPSSTSLPH
HLSSSSNSPPPHRDSSSPEPDSTNESLPFVYHSSSLDSRIEMLLKEQKAKFSFLASDEEE
EEDRKEVKQKGRSGSGGGRRGGQRDADEQERQADNGERDHRKKGERERDGHRGRKRGKGG
EGRKSPPVPAEPALPSSSSHSPHVPPPPEEPQPQVVVSGASQEESSQAVSADASSRTGAL
TPPFNGESQASPRSSGEDMEISEEEDETTPITTVVTHQPSVASGSSPSSSQAALPQSDPS
SPPPAISDSSQHFGTSLHPPVPSYPPHLPPPPPPGYSLQPPPPPGIPPLPHMELHPEYPP
QMPPHIYDYASSMELMNQYSGGTPMSFQMQTHMLSRLHQLRMSAANGTPGPGEGATADYS
SYHLHSMPPPHHPYMDQEGSGGGAHYDQDHRYMPPPMSYPYPDPQTSQIPPPGHHSIPPP
HTGWPPHVLPPPFASYMPPPGYGSILPGEGDGFRAPGEEIALLAENPHEATVQMVLATLI
QEMKNIMQRDLNRKMVENVAFATFDEWWERKETKAKPFQTMVRGVSALRDDEKKEEKVSR
PREPLTSLVDWAKSGGVEGFSLRGALRLPSFKVKRKEPQELEEGDMKRPRPSTPPDEDDE
AGSRRMKEADRHGAERDNKRRKKKPRSRKPWELGSEGEETSDESSSEKEDEEEAESEKES
GDEAISADSDDESLSSSSEGSSSSTSSSSSSSEDEDEEVEPAESEGPDSMDESTMDSTTG
KEEDGVSAAAVVSKADLKKGVPIGKEDAPTKHPLSPPYPRPSSPVVLVPPLKKRRKTVSF
STEEMDGKVPAAPYSLSPSHLAGDASGRLPDANPPAAPPSGRPTPGIQLLPFASKPGEGN
ALIVPPPGRTPDPEDPKKGPHIPPFTSPAKSPVKRSTSKESPKSPAPPVMVCRTVQNLPL
DHASMCRTAFEEAPPSPSVSKRGRGRSRTPSFSASCQSLREEDGGGEEPEQRLKLREQLG
ASSLLQLASASTTDLSVLADVALKMDPEAGDSEETETSDEAEEQKMEGGLFSPDSLALVM
SPEGVVVLLEHNYCKPPVLSAPSNNKKTPSRQDSSVLLPADLNSISGVLEAPEEVIGEAL
PARGGIEYLSAVGELYDSDGMSPAPAVTPSPKNKNETAKGLELDKDKSKKRRRKDKENLE
LHSTKKPKEQPSKKQRKRKLEDSDLEEDVDVEELESGELSSSDSESEVIEEVRKSERLFL
QEAGVTSNRWPKPIPAPEPPEIKFENRSEFEQMTILYDIWNSGLDAEDLMLLKTTYEKLL
QNDHNSDWLNDTHWVQHTVTNLPNPRRKKKSADGQLREHVTGCARSEGYYAISRKEKDVY
LDLDLPEQVIREVENVDTSGANRVLSERRSEQRRLLTVIGTTAVMDSDLLKLNQLKFRKK
KLRFGRSRIHEWGLFAMEPIAADEMVIEYVGQNIRQMVADHREKIYAQQGIGSSYLFRVD
HDTIIDATKCGNLARFINHCCTPNCYAKVITIESQKKIVIYSKQPIAVNEEITYDYKFPL
EENKIPCLCGTENCRGTLN
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atggatccagacagtgggacagaatcacaaaaagctgtcagtttgcagtggaaaagctac
aaactcgttcaggacccagccatccgacgggtcacacagaaaatctacagatatgatgga
gttcatttcagcgtgccagattctggatttccaccagtgggagatctgcgagaccctaga
ccgcgaaggctatggtccagatattcagaactctctctacctgtgccgaaatttaagctt
gatgaattttttgtgggccccatacccctcaaggaggtgaccttcgccagacttaatgat
aacatcaaggagccctttttggcagaaatgtgttccaagtttggtgaggtggaggagatg
gaaatattgtttcatccaaagaccaggaagcatttgggcctggccagggttctgttcacc
agcactagaggagcaaaagacacagtcaagcacctgcacaatacttcagtgatgggtacc
atcattcatgttcagctggatattaaaggtcagcagaggcagaagtattacgacctgata
gtaaacgggtcttacactccccagactgttcccctgggagggaaggctttaacagacaag
gttcagcctcagcccccgactcagccccagcctgacacgccgtcagagatgaggcgtcgg
ctgtccagcgagctggtggctttggccgcgggagtccaggctctcacatcaggaggcgtc
acaccctgctctaatgacaccggctacagtgagccgcgaatggaaaccactccctcctcc
ttagtgggccagttcaccccaagttcctctgcgtcgtctcagggcggcgggggcacaccg
tacagctccaggtccgggacacctttctcacaagactcgggcttcaccagcaccaggcat
tcgagttacagcacaagcaatgtgagcagcggataccctcaccaggatatgataccttcc
tcctcttctgcagtttcatccactgttgggggttacaaagtatcccgctaccctgacgac
ttacaggatccgtcagtgtatcaccgtggtcgccccgtttacccccatcccacatcgttc
cgccccaacgagccgccgtgctaccctcccttcaccggtgtcggaggaccaggtccacac
atggcccaccactcctccatgcctccgcctcccatgtccaaccagtttgacccgccccca
atgtcggacagggagcgggaaagagactcggcggggaggtacggggcggcggggatcggt
tccagaaggtcgtcttaccaccaccagcaggacgcgaactcctcctccaagtaccacgcc
catcactcccaccactcggagcgcagggatgagagggcgtaccgccgcgacagccagggg
tcccgctcgggcgaacacaaccaccagcggcaccggaatcaccaccacactcacaaccac
cacggaagcagcagccgccggagaagcagccacgaccgggacagagaccgggacagagat
cgagatgccgactaccccaataactcggaccccagatacagctcaaactcataccgctct
tcctctaacagcatgtctcctcctccgtcatcctactctgcatacgcctccaaagaaccg
gcctccgcccctcctcagggctcggacgccgccactcgtccaggaggcgccaacgcttca
gagcgagtgtctctgccgcctgctggtgctgaccatcctgcccatcacagtgctctgccg
cctccaccgccgccaccacctccactcccacctgcatcggttatcgctgcggccgtagcc
gagactctcggaacgctagacttcaatcaggacagccccgtccgcggagacacgtggacg
aagcccaagcgccgtcccagcactccaccggccccgccaaagacgcccccgccctcctcc
ccgacccagccctccgtggcatcctcctccaactctccctcttcaacatcacttcctcat
cacctttcttcttcgtccaattccccgccgccgcaccgagactcctcctccccagagcca
gactccacaaacgaaagtttgccgttcgtctatcacagcagcagcctggactctcgaatt
gagatgctcctgaaagaacagaaggccaaattctccttcctcgcttctgacgaggaggag
gaggaagacaggaaggaggtgaagcaaaagggccgaagtgggagtggaggagggagacga
ggcgggcaacgcgatgcagacgagcaggagcgccaggcagacaacggggagagagaccat
cggaagaaaggggagagggagcgagatggtcacaggggacggaaaaggggaaaaggagga
gagggcaggaaaagtccacctgtacctgcagaacccgcgcttccttcctcctcctcacat
tccccccacgtcccacctcctccagaggaacctcaaccccaggttgtcgtctctggagct
tcacaggaggagtcttctcaggctgtttctgcagatgcatcgagcaggacgggagcgctt
actccgccttttaacggggaaagtcaggcttctcctcgttcttctggagaagacatggag
atctcggaggaagaggatgaaacgactcccataaccaccgtggtgacccaccagccgtca
gtcgcctcaggctcctccccttcctcctctcaagctgcattaccacagtcggacccctcg
tccccgccgccagccatttctgactcctcccagcactttggcacttcactgcacccccca
gtaccatcctacccccctcatttaccgccccctccgccgcccggttactcccttcagccc
cctcctccgcccggcattcctcctctcccccacatggagctgcaccccgagtaccccccc
caaatgcctccccacatttatgactacgcctcctccatggagctcatgaaccagtacagc
gggggcacccccatgtccttccaaatgcagacccacatgctcagtcgcctgcaccagcta
cgcatgtctgcggctaacgggacgccgggcccgggcgagggcgccaccgccgactactcg
tcctaccatctccactccatgccgccgcctcatcacccctacatggaccaagagggcagc
gggggcggtgctcactacgaccaggaccatcgatacatgcccccccccatgtcctatccc
taccccgacccgcaaacctcccagataccgccccccggccatcacagcatacccccaccg
cacaccggctggccgccacacgtcttaccgccgccctttgcgtcctacatgcccccaccc
ggctatggctctattctaccaggagaaggagatggatttagggctcctggggaggagatc
gctctgttggctgagaatccacacgaagccaccgtgcagatggtcctggccactctgatc
caggaaatgaagaacatcatgcagagagacctgaaccgcaagatggtggagaacgtggct
ttcgccacgtttgatgagtggtgggaaaggaaggagaccaaggccaagcctttccagaca
atggtgagaggagtttctgccttaagggatgatgagaaaaaggaggagaaagtcagtcgt
cctcgggaacccctcacgtctctggtggactgggcgaagagtggaggagtggagggcttt
tctctcagaggagccttacgtttaccttcctttaaggtgaaacggaaagagcctcaggag
ctggaggaaggagacatgaagagaccccgaccctccactcctccggatgaagatgacgaa
gctggaagcagaagaatgaaagaagcggacagacacggagcagagagggacaacaagagg
aggaaaaagaagccgaggagtcgtaaaccctgggagctgggcagcgagggcgaggaaacg
tctgatgaatcctcctctgaaaaggaggatgaagaggaagctgagagtgaaaaagagtct
ggtgatgaagccatcagtgcagacagtgatgatgagagcctctcttcatcctccgaaggc
tcctcttcctccacatcctcctcttcatcctcgtctgaagatgaggatgaagaagtggag
ccagctgagagtgaaggtccggacagcatggatgagtcgacgatggacagtacaacagga
aaagaggaggacggggtgagcgctgcagctgtagtttcaaaggcagatctcaaaaaaggt
gtcccgatcggcaaagaggacgctcctaccaagcatcctctgtcaccaccttacccccgc
ccctcatctcccgttgtcctcgtcccgcctctcaagaaacgccgaaagacggtctccttc
tccacagaggagatggatggaaaagttccagccgccccatattccctgtcaccctcacac
ctggccggagacgcctcgggaaggcttccagacgcaaatccgcctgccgcgccgccctct
ggacgccccactccaggaatacagctgctccccttcgcctccaagccgggtgaagggaac
gctctcattgtccctccacctggacgaaccccggatcccgaggaccccaaaaagggcccc
cacatccccccctttacgagtcctgccaaatcccccgtcaaacgcagcacgagcaaagag
tcgcccaaatcccccgccccacccgtcatggtgtgccgcactgtgcagaacctgccgttg
gaccatgcctccatgtgcaggacggcgttcgaggaggcgccgccgtcaccgtctgtcagc
aaacgtggccgaggccggtcccggacccccagcttctccgcctcttgtcagtctctcaga
gaggaagatggaggaggagaggagccggagcagaggctgaagctccgggagcagctggga
gcctccagcctcctgcagctggcctcggcctccacaaccgacctgtcggtgttggctgac
gtagctttgaaaatggaccctgaagctggagattctgaggagaccgaaacgtctgacgag
gcagaggagcagaagatggaaggaggcttgttctccccagattccctcgctttggtcatg
agtccggaaggagtcgtcgtccttctagaacacaactactgcaaaccgcctgttctgtct
gccccatccaacaacaaaaagacgccttctcggcaagattcctccgtcttactaccagca
gacctcaactctatttctggagtcctggaagctccagaggaggtcattggagaagcgtta
ccggccagaggagggatagaatacttgtctgctgtgggagagctttatgactctgacggc
atgagcccagcgccggccgtcactccgtcaccaaagaacaagaacgagacagccaaaggg
ctggagctcgataaagacaagagcaagaaacgcaggagaaaagacaaagagaacctggag
ctacacagcaccaagaaaccgaaggagcagccaagcaagaagcagcggaagcggaagctt
gaggactcggacctcgaagaagacgtcgacgtggaggagctggagtcaggagaactctcc
agctccgactctgagagcgaggtgatcgaagaagtgaggaaaagcgagcgcctcttcctt
caggaggcgggggtgacgtccaaccgttggcccaaacccatcccggcaccggagccgccg
gagatcaagtttgagaaccgcagcgagttcgagcagatgaccatcctgtacgacatctgg
aactccggcctggacgccgaagacctgatgctgctgaagacgacatacgagaagctgctg
cagaacgatcacaactccgactggctcaacgacacacactgggttcagcacactgtgacc
aacttgccgaaccctcgccgtaagaagaagagtgcagatggacagctccgcgaacacgtg
accggctgcgccagaagtgaaggctactacgcgattagtcgcaaggagaaggacgtctac
ctggatctggacttacctgagcaggtcatacgggaggttgaaaacgtggacacctcggga
gcgaacagagttctgtcagagagacgttcagaacaacgccgccttcttactgtcatcgga
acgacagccgtcatggactctgaccttctgaaactcaaccagctcaagttccgtaagaag
aagcttcgttttggacgcagcaggattcacgagtggggtctgtttgccatggagcccatc
gctgctgacgaaatggtcatcgagtatgtcggtcagaacatcagacagatggtggcggac
catcgagaaaagatttacgcacagcagggcatcgggagcagctacctgttcagagtggac
cacgacacgattatagacgccaccaagtgtggcaacttggcccgattcatcaaccactgc
tgcactcccaactgttacgccaaggttatcaccatcgagtcccagaagaagattgtgatc
tactccaagcagcccattgccgtcaatgaagagatcacctatgactataagttcccactt
gaggagaacaagatcccgtgcttgtgtggaacagagaactgccgggggactctcaactaa
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integrated database retrieval system
