Oryzias melastigma (Indian medaka): 112148891
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Entry
112148891 CDS
T07439
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
112148891
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148891
03051 Proteasome [BR:
oml03051
]
112148891
Membrane trafficking [BR:
oml04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
112148891
Proteasome [BR:
oml03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
112148891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
112148891
NCBI-ProteinID:
XP_024132074
Ensembl:
ENSOMEG00000023518
LinkDB
All DBs
Position
LG9:complement(14925350..14930821)
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AA seq
397 aa
AA seq
DB search
MSDSVPDEQGAASDPLEPEAIHIAIGAPADARGFTVGGNMTVAELKVALTEWLSASAEQL
ELIHSGRVLRESELIGHLEGQDRCVRLQVIQRVQLTEDQSSEADRSELPAAPDSDLSFPP
TPTSPLHQGKVREVCDLENNEPGFCPAHHQQMDQQQLTDQEFRCDPVTSAVSSSELTQLP
HTDLERKKMNPSSRCVYSGEQKSNPTSLLSSPVTSVIEELTVIPTEAPSSQSSVNAGMQS
LLQEITANPSLMDSLLSGPHVSSLLNCLSQYPDLAAQMLPSHPFLTGNPLLQQQMKQQLP
LFMQQMQSPELLVSMFNPKAMKALLQIQQGLQTLAEEAPFLIPAASYDSTDADVALENQS
GRSPPAVAVAEQQQQQFVHQMLQSLANTRISQEEEDL
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactcggttccagatgagcagggagcagcttcggaccccctcgaacctgaagcc
atccacatagctataggagcgcccgctgacgctagaggcttcactgtaggaggaaacatg
accgtcgcagagctcaaagtggctctgacagaatggctgtcggcctctgcagagcagctg
gagctgatccactccggacgggtccttagagagtcagaactcattggtcaccttgaggga
caggaccggtgcgtcaggctccaggtcatccaaagggttcagctcactgaagatcagtcc
tcagaagcagacagatcagaactcccagcagccccagattctgacctgagctttcccccg
actccaacatctcctctccatcagggaaaagttcgagaagtttgcgacttggagaacaac
gagccaggcttctgtcctgcacaccaccaacagatggatcaacaacaacttactgaccaa
gagttccgctgtgatccagttacgagtgcagtctcctcatctgaattgacccagcttcct
cacacggacctagagagaaagaaaatgaatccatcgtcaagatgtgtgtattcgggagaa
caaaaaagcaatccaacctccctcctctccagtcccgtcacaagtgtcatcgaggagctg
actgtcattcccactgaggctccaagctcccagagctctgttaatgcaggtatgcaatcc
ctgctgcaggagatcacggccaatcccagcttgatggacagtttgctttctggaccgcat
gttagcagccttttaaactgcctcagtcagtacccggacttggcagcacagatgttgcca
agtcacccgtttctgacaggaaaccctctcttacagcagcaaatgaaacagcagcttcct
ttatttatgcaacagatgcagagtccagagctgctggtgtccatgtttaaccccaaagcg
atgaaagcccttctacagatccaacagggcctacagactctggctgaagaagcccccttc
ctcatacctgctgcttcctatgactccaccgatgctgatgttgctctcgagaaccaatca
ggaaggagtcctccggcggtagcagtggcagaacagcagcagcagcagtttgtgcaccag
atgctacagtcactggctaatactcggatcagtcaagaggaggaggatctttag
DBGET
integrated database retrieval system