Oryzias melastigma (Indian medaka): 112150130
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Entry
112150130 CDS
T07439
Symbol
gpc1a
Name
(RefSeq) glypican-1 isoform X1
KO
K08107
glypican 1
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112150130 (gpc1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112150130 (gpc1a)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
112150130 (gpc1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112150130 (gpc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
AKNA
Motif
Other DBs
NCBI-GeneID:
112150130
NCBI-ProteinID:
XP_024133916
Ensembl:
ENSOMEG00000009516
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All DBs
Position
LG4:complement(17165085..17201749)
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AA seq
542 aa
AA seq
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MRLPVLLCVAVSLCAAASPEENKSCADLRRFYTGKGFTLEGVPQTEISGEQLRMCPQGQT
CCTSSMEERLANLSAKETEGQIRKAGRSLQTTLNTLRTSFRSFFTDLHGLSEGSLEQVLT
PLGALYSQNTRLYTDLYADLYLYYQGSSLSLDESLSDFWSRLLERQFKISANTDASLSED
YLECVAKQQETLRPFGDVSRDMKAKVIRAYVTARSFVQALSISEEVVNKVLNQVSLGPEC
LKALMKLVYCSHCHGLSSVKPCFNYCSNVMKGCLANQADLNPEWDNLIDTMIEVVSSFSA
EPSLEAVLSSIPARIYEAVHYLQENMNTFTSTVYRTCGSLEESGRGSPALHEQKTKSSPL
TALEYKPSQTAELRLKAQMVDLIKQLKVMHQYWVKLPVELCKKVAAGESNQDKCWNGNTK
ARYLPEVMGDGLANQINNPEVELDITKPDMNIRQQIMQLKIMSSKLKNALDGNDVDFQDA
SDDISGSGSGVCSGGLCALSRPGLYTFTPDNKPVGGSAPQRSALSLLLLLLLSPVTVLLL
QR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcccggtgctcctgtgcgtcgcggtcagtctgtgcgcggcagccagccccgag
gagaacaagagctgcgccgacctgcggcgcttctacaccggcaaagggttcactctggag
ggggttcctcagactgaaatctcaggtgaacagctcaggatgtgtcctcagggtcaaacc
tgctgtaccagcagcatggaggagaggctcgctaacctgagtgccaaagaaacagaggga
cagatcagaaaggccggcaggtccctgcagacgactttgaacactctgcgaacaagcttt
cgctccttcttcactgacctgcatggcctttctgagggctccctggagcaggtgttgact
ccactcggcgccctgtactcgcagaacacccgcctgtacacagatctctacgccgacctc
tatctgtactaccagggctcgtctctcagcctggacgagagtctgtctgatttctggtcc
cgcctgctggaacgacagttcaaaatctctgccaacacagatgccagtctatcagaggat
tatcttgaatgtgttgctaagcagcaggagacgctgagaccattcggggacgtctcacga
gacatgaaggccaaggtgatccgggcttatgtcaccgcgaggtcgtttgtccaggcgctg
tcaatcagcgaagaagtagtcaataaggttctaaatcaggtctctctgggtccagagtgc
ttgaaggctctgatgaagttggtctactgctcccactgccatggcctgtcttccgtcaag
ccctgcttcaactactgctccaacgtcatgaagggttgcttggccaaccaggctgatctg
aacccagagtgggataatctgatagacacaatgattgaggtggtgtccagtttcagcgca
gagcccagtctggaggccgttctctcctccatcccggctcgaatctacgaggccgtgcac
tacctgcaggaaaacatgaacaccttcacaagcacagtgtatcgaacatgtggaagtctg
gaagaatctggaagaggaagtcccgccctccatgaacagaagacgaaaagcagcccgtta
actgcactggaatataaaccatcgcagactgctgagctcagactgaaggcgcagatggtg
gatctcatcaaacaacttaaggtcatgcatcagtactgggtcaaactgcctgtggaactc
tgcaaaaaagtggcagcaggagaaagcaatcaggacaaatgttggaatggaaatactaaa
gccagataccttccagaggtgatgggcgacggcttagccaatcaaatcaacaaccctgaa
gtggagctggacatcacaaaacctgacatgaatatacggcagcagatcatgcagctcaaa
atcatgagcagcaaacttaaaaacgctctggacggcaatgatgtggacttccaggatgca
agtgatgacatcagcggctcaggaagcggcgtgtgttcaggcggtctgtgcgcgctcagc
aggccaggactgtacaccttcacaccagacaacaaaccagtcggtggctcggcgcctcaa
aggtccgctctcagcctgctcctcctcctcctcctctcaccggtgaccgtcctgctgctt
cagcgatga
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