Oryzias melastigma (Indian medaka): 112153608
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Entry
112153608 CDS
T07439
Symbol
hdx
Name
(RefSeq) highly divergent homeobox isoform X1
KO
K24884
highly divergent homeobox
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112153608 (hdx)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
112153608 (hdx)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
112153608
NCBI-ProteinID:
XP_024139723
Ensembl:
ENSOMEG00000014541
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All DBs
Position
LG10:21629065..21637137
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AA seq
779 aa
AA seq
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MAAPFPSTKMEAWPQRRGQQTMNLRSVFTAEQQRILERYYDNGMTNQSKACFQLILHCAQ
EAKLDFSVVRTWVGNKRRKLASKIDQNGSISHSLPGHGISGGLHPSLAGTTLSNHSLAAG
VLLSTDMTAARNIQNRVHLLPQSSSFPSLSSTSSSPSSSSPLSSGSNNNTSNNDVILTGI
YSLNSVPRSQPRSTAPSEPSASSPLISQVLQSRNTSTSSSIHSKLVSLAQTLPSLTSASG
PLVYTAVRKGTLSVAEGVISAGAGVVPHSWTRQYGTGQTRPWSASSQAQTQALPRPHSNP
QLPAPQKPWVSPPNQNPSPLNEQTPRIQQVFTLSEKGVEEHLRHGETSARKSQETHRPTV
RPLDTSHNLSIAMETGDEEDEWQREEELANMAAQSHIHRERAVISPAKAEGSVVRGGRTP
PPDVSKLAAVESSTTIQGSYSFTVQTSVTGESSSQPSLDVSAAPWVISNSRKRTLQDRTQ
FSDADLVQLKRYWDRGMTNLGSMCREKIAAAANQLNIDAEIVKEDKKCILKKAQLKQTWI
SNRRRKYRLMGIEIPPAKGRPIMFTSSPSGNKSDGERPATPDLGEDLNDEGSPCLPEDGT
LDSREINDGMDISCVAPLTNNVKIENIDEDEEADDDDEIVASDLEQMQNLLEFKHEEVQF
LEHELENQKQRYQELVNFTKGLLVAVRTKDLKRQQELLASLPQPSDQDWDVTLEQGVQQD
ATSNHHDLQADGPRSADRAKDRVDEGLLQVAVKQDDAMTEEAEPSASEDQLQETVTQIK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggccgccccgttcccctctactaaaatggaggcgtggccacaaaggcgtggccagcag
actatgaatctgcggtcagtatttacggctgagcagcaaaggatcctggaacgttattac
gacaacgggatgaccaatcagagcaaggcttgcttccagctcatacttcactgcgctcag
gaggccaaactggacttcagtgttgtccggacatgggtcggcaacaaaagacggaaactt
gcttccaagattgaccagaatggaagcatatctcattccctgccgggtcacggaatatct
ggagggctgcatccctctttagctggaaccacactttccaaccacagcctggctgcaggg
gtgctgctctccactgatatgactgcagcgcgcaacatccagaaccgcgttcacctcctc
cctcaatcctcatctttcccatctctctcttcaacctcgtcctccccgtcatcctcttcc
cctctcagcagtggaagcaacaataacactagtaataacgatgtaatactgacaggcatt
tactccctaaattcagttccccgctcccaaccccgatccacagcgccctcggagccttcg
gcgtcttcacctctgatcagccaggtgctgcagagcagaaacacctccacgtcctcgtcc
atccattccaagctcgtttccctcgctcagactctcccgtctctcacatctgcctcagga
ccgttagtctacactgcagtcaggaagggcactttatccgttgcggaaggagtgataagt
gcaggagcaggagtggtacctcacagctggactcgacagtatggaacagggcagacgcgc
ccctggtccgcctcctcacaagcccagactcaggccctgcccagaccccactcgaacccc
caactgcctgccccacagaagccctgggtctccccgcccaaccagaaccccagccccctc
aacgaacagacgccccgcatccagcaagtcttcaccttgtcagaaaaaggcgttgaggag
cacctcagacacggagagacctccgctcgtaaaagccaggagacccacagaccaaccgtt
cgacctctagataccagtcataacctttccattgccatggaaaccggagatgaagaggat
gagtggcaaagggaagaggagctcgcaaacatggccgctcaatcccacatccacagggag
cgggccgtgatcagcccggcgaaggctgaagggtccgtcgtgaggggcggccgcacgcct
cctccggacgtctccaaactggctgcagttgagagcagcacaacaattcagggcagctac
tcctttacagtgcagacctcagttacaggagaatccagttcacagccttcactagatgtg
tctgcagccccctgggttatcagtaactccaggaagagaacactgcaggatcggactcag
ttcagcgacgcagatctcgtccagctgaagcgctactgggaccgaggcatgacgaacctg
ggctccatgtgcagggagaagatcgctgctgcagccaaccagctcaatatagacgctgaa
atagtcaaggaggacaaaaaatgcattttgaagaaagcacagttaaaacagacgtggatc
agcaacagacggagaaagtaccgcctcatggggatcgaaatccctcctgctaaaggccgg
cccatcatgttcacaagttctccttcaggaaacaagtctgacggggagagacccgcgacc
cccgacctcggggaggacttgaacgatgagggttccccgtgcctgcctgaagacggaacg
ctggattcacgggagataaatgatgggatggacatttcctgtgtggctccgttgaccaac
aatgtgaagattgagaacatcgacgaggatgaggaagctgacgacgatgatgaaattgta
gcttcagatcttgagcaaatgcagaacttgctcgaattcaagcatgaagaagtgcagttt
ttagagcatgagctagagaaccaaaaacaaagataccaggagcttgtaaatttcaccaag
ggtctcctcgtcgctgtgaggaccaaggacctgaaacgacagcaggagctcctggccagc
ctacctcagccttcagaccaggactgggacgtaactctggaacagggggtccaacaagac
gcaacgagcaaccaccacgacctgcaggcagacggcccgcgtagtgccgatcgtgcaaag
gatcgagtcgatgaaggactcctgcaggtcgctgtgaagcaagacgatgcaatgaccgag
gaagctgagccctctgcatcagaggaccagttacaggaaacagtcacacaaataaagtga
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