Oryzias melastigma (Indian medaka): 112153938
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Entry
112153938 CDS
T07439
Symbol
tfec
Name
(RefSeq) transcription factor EC isoform X4
KO
K15591
transcription factor EC
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oml03000
]
112153938 (tfec)
Transcription factors [BR:
oml03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
112153938 (tfec)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3371
MITF_TFEB_C_3_N
HLH
OrsD
Motif
Other DBs
NCBI-GeneID:
112153938
NCBI-ProteinID:
XP_024140191
Ensembl:
ENSOMEG00000012835
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All DBs
Position
LG23:complement(9940421..10011152)
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AA seq
430 aa
AA seq
DB search
MPHLSDCSYYKMRDATRASKVQSHLENSKFHLHQSQNQPVKQYLTLGSKLASSAGSGHAV
QHPHTPGQPLATVPIMRNGHMAPVSDGSNPNSPVTLLTLASHDSEFPMDEVIDDLISLES
GFNDGGLDCMENNIIMQNNVSLSSSMLDVYGGEQGMNPPNGGMSPTSNPTKLTVKREYTE
HDTRVMAKERQKKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEY
IRWLQKEQQHARELESRQKKLEQANRRLLLRIQELEIQARAHGLPNMATALGTVELSNHL
LKQPQQPQQQQSPPQAPQPQQAPLYQEDPNNDYLQRIAVVTGVPSIAAAGTPQDHISGGD
ACTTFSDPLSHFTDFFTASLKEENQLDEILMDEALSPFGTDPLLSAGSPGAASKDSSRRS
SFSSGEGDDL
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgccacacttaagcgactgcagctactacaaaatgcgggatgcgaccagagcttcaaaa
gtgcaaagccacctggagaactccaagttccatctccaccagagccagaaccaaccggtg
aagcagtacctgacgctgggctccaagctggcctcctcggcgggttcgggtcacgccgtg
cagcatccacacactcctggccagccgctagccacggtgccgatcatgaggaacggacac
atggcgccggtcagtgacggcagcaacccgaacagccctgttaccctcctcacgttggcc
agtcatgacagtgagtttccaatggatgaagttattgatgacctgattagtcttgaatcc
ggtttcaatgatggaggcttggattgcatggagaataacatcataatgcaaaacaatgtg
tccctcagcagcagcatgctggacgtctatgggggtgaacaaggtatgaacccccctaat
ggtggaatgagccccacatctaaccctacaaagctcactgtaaaaagggaatacacagag
cacgacaccagggttatggcaaaggagaggcagaagaaagacaaccacaatctgattgaa
agacggcgaagatacaacattaactacaggattaaggagctggggacactcatccccaag
tcaaatgaccctgacatgcgctggaacaaaggcaccatcctgaaggcctcggtggagtac
attcggtggctgcagaaggagcagcagcacgctcgggagctggagagccgtcagaagaag
ctggagcaagccaacaggaggctgctgctgaggatccaggaacttgagattcaagcgcga
gcacatggacttccaaacatggccaccgccttgggcaccgtggaactgtccaatcacctc
ctcaaacagcctcaacagccgcagcagcagcaatcgcctccccaggccccgcaaccacag
caggcccctctctaccaggaggacccgaacaacgactacctccagagaatagccgtggtg
actggcgtaccatccatcgccgccgccggcacgccgcaggaccacatttccggcggggac
gcctgcaccaccttctctgacccgctgtcccacttcacagacttcttcacagcctcgctc
aaggaggagaaccagctcgacgagatcctcatggacgaggcgctgtcgccgttcgggacc
gacccgctcctctccgcgggttcccccggagcggcgtccaaagacagcagccgcaggagc
agcttcagctccggcgagggcgacgatctataa
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