Oryzias melastigma (Indian medaka): 112155799
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Entry
112155799 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112155799
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112155799
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
SPRY
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
Prok-RING_4
zf-RING_6
zf-RING_11
AceK_regulatory
Motif
Other DBs
NCBI-GeneID:
112155799
NCBI-ProteinID:
XP_024143512
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Position
LG17:complement(27403098..27405684)
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AA seq
553 aa
AA seq
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MAQQGNQLDKERFSCSICLDLLQDPVTIPCGHSYCMKCIQGFWNEEKKIHSCPQCRKTFI
PTPVLMKNTMLADLVDQLKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLFCLAS
YCEKHLQPHLDEAPLMKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHK
DHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVEDSEKI
FTQMINLIQKRSCDVTQQIRSQQLTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEEVTAAVSELRDKLQDILREERTNISPTVT
RLKILPPEPKPKSRAYFLKYSYQITLDPNTAHRRLLLSEENRKVTIMEQPQSDLCNTKRF
IRWFQVLSRESLTGRCYWEVERRGTFVYVAMAYENISRSGDEGGFGLNDKSWALSCSPNS
FSFLHNNTQTSISAPGSSRVGVYLDHSAGVLSFYSVSERMTLLQRVQTTFTQPLHAGLWM
FNVGDTAEFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcaaggaaatcaacttgacaaagaacgtttcagctgttccatctgtctggat
ctgctgcaagatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
ggattctggaatgaggagaagaaaatccacagctgtcctcagtgtaggaagaccttcata
ccgacgcctgtcttgatgaaaaacaccatgttagcagatttagtggatcagctgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtatcctgt
gatttctgctctggaagaaaactgaaagccatcaagtcctgtttgttctgtctggcttct
tactgtgagaaacaccttcaacctcatttggatgaagctccgctaatgaaacacaaactg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgtacggatcagaagtgtatctgttatctctgctctgtggatgaacataaa
gaccacgatacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggaccgagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtggaggacagtgagaagatc
ttcactcagatgatcaatctcatccagaaaagaagctgtgatgtgacgcagcagatcaga
tcccagcagctaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcagagctc
agagacaaactacaggacattctgagagaggaacggacaaacatctcaccgacagtcact
cgtttgaagattttgccaccagaaccaaaacctaaaagcagagcttacttcttaaaatat
tcatatcaaatcacactggatccaaacacagcacacaggcgactgttgctgtcagaggag
aacagaaaagtgacaataatggaacaacctcagtctgatttgtgtaatacaaagagattc
attagatggtttcaggttctgagtagagagagtctgactggacgttgttactgggaagtg
gaaaggagaggaacctttgtttatgtagcaatggcatatgagaacatcagcagatcagga
gatgaaggtggatttggtttaaatgacaaatcttgggccctgagttgttctccaaacagt
ttctcatttctccacaacaacacgcaaacatccatctcagctcctggttcctccagagta
ggagtgtacctggatcacagtgcaggtgttctgtccttctacagcgtctctgaaagaatg
actctcctccaaagggttcagaccacattcactcagccgctccatgctggactgtggatg
tttaatgttggagacacagcagagttctgtaaactcaaatag
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