Oryzias melastigma (Indian medaka): 112155802
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Entry
112155802 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112155802
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112155802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-B_box
SPRY
zf-H2C2_2
V_ATPase_I
Gp58
Motif
Other DBs
NCBI-GeneID:
112155802
NCBI-ProteinID:
XP_024143514
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Position
LG17:complement(27388555..27390775)
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AA seq
515 aa
AA seq
DB search
MKCIQGFWDGENIYSCPQCRKTFIPRPVLEKNTMLADLIEELKKTGLQAAPADHCYAGPE
DVSCDVCSGRKLKAIKSCLICLASYCEKHLQPHLDEAACKIHKLVEPSKNLQQNICSIHD
EVMKMFCRTDQKCICYLCSVDEHEGHKIVSAAAERTERQRDLEESQQQIQQRIQDREKEV
KLLQQEVEAINHSADQTVKDSEKIFTQMIHLIQKRSCDVKQQIRSQQQTEVSRVKDLQEE
LEQEITELKRRDAELKQLLLTEDHSQFLLNYPSLPPLSESTPSSSINVRPLRYFEEVTAA
VSELTDKLKELLREEWTNISLTVTNVDVLLPEPEPKSRAGYFQFSCHITLDPNTAHRQLL
LSEENRQKIEQPQSDSDHPDRFTEYVQVLSRESLTGRCYWEVEWRGTVVFVAVTYKNISR
SGNESRFGFNDKSWTLSCSPKRFLFYHNSLQTSISAPVSSRVGVYLDHKAGVLSFYSVSE
SMTLLYRVQTTFTQPLHAGLGLGWLGNTAKFCKLK
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtattcaaggattctgggacggagagaatatctacagctgtcctcagtgtagg
aagaccttcataccgagacctgttctggagaaaaacacaatgttagcggatttgatagag
gaactgaagaagactggactccaagctgctcctgctgatcactgctatgctggacctgaa
gatgtgtcctgtgatgtctgctctggaagaaaactgaaagccatcaagtcctgtttgatc
tgtctggcctcttactgtgagaaacaccttcaacctcatttggatgaagctgcatgcaag
atacacaagctggtggaaccctccaagaacctgcagcagaacatctgctccattcatgat
gaggtgatgaagatgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtg
gatgaacacgagggacataaaatagtctcagctgcagcagaaaggactgagaggcagaga
gatctggaggagagtcaacaacaaatccagcagagaatccaggacagagagaaagaggtg
aagctgcttcaacaggaggtggaggccatcaatcactctgctgatcaaacagtgaaggac
agtgagaagatcttcactcagatgatccatctcatccagaaaagaagctgtgatgtgaag
cagcagatcagatcccagcagcaaactgaagtgagtcgagtcaaagatcttcaggaggag
ctggagcaggagatcactgagctgaagaggagagacgctgagctgaagcagctcttactc
acagaggatcacagccagtttctgctcaactacccctcactgccaccactcagtgagtcc
acaccctcatccagcatcaacgtccgtcctctgagatactttgaggaggtgacagcagct
gtgtcagagctcacagacaaactgaaggaacttctgagagaggaatggacaaacatatca
ctgacagtcactaatgtggatgttttactaccagaaccagaaccaaagagcagagctggc
tacttccaattttcatgtcatatcacactggatccaaacacagcacacagacaactgtta
ctgtcagaggagaacagacagaaaatagaacaacctcagtctgattctgatcatccagac
agatttactgagtatgttcaggttctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagaggaacagttgtttttgtagcagtcacatacaagaacatcagcagg
tctggaaatgaaagtagatttggttttaatgataaatcttggacattgagctgttctcca
aaaagattcttattttaccacaacagtctccaaacctccatctcagctcctgtttcctcc
agagtaggagtgtacctggatcacaaagcaggtgttctgtccttttacagcgtctctgaa
agcatgactctcctctacagagtccagaccacattcactcagccgctccatgctggactg
gggctcggttggcttggaaacactgcaaagttttgtaaactgaaatag
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