Oryzias melastigma (Indian medaka): 112155816
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Entry
112155816 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112155816
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112155816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
U-box
Prok-RING_4
zf-RING_10
zf-RING_5
Gp58
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
112155816
NCBI-ProteinID:
XP_036072056
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Position
LG17:complement(27433591..27435717)
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AA seq
551 aa
AA seq
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MAQSGVDLHQERLCCSICQDLLKDPVTIPCGHNYCMKCIQGFWDEEEKIHSCPQCRKNFM
PRPVLVKNTMLADLIEELKKTGVQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLICLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHR
GHNTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTQMIRLIQKRSCDVKKQIRSQRQTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEEVTAAVSKLRDKLQELLREEWTNISATVT
HVDVLLPEPEPKSRDGFLKYSRQISLDPNTAHRQLLLSENRKVMFMERPQSYSDHPDRFT
QYYQVLSRESLTGRCYFEVEWREKVDVAVTYKNISRSGNESGFGFNNQSWVLSCSTNSLA
CFHNSIQTPISAPGSSRVGVYLDHRAGVLSFYSVSESMTLLHRVQTTFTQPLHAGVWLYK
TGVSAEFCTLK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaagtggagttgatctgcatcaagaaagattgtgctgttccatctgtcaggat
ctgctaaaggatccggtgactattccctgtggacacaactactgcatgaagtgtattcaa
ggattctgggatgaagaggagaaaattcacagctgtcctcagtgtaggaagaacttcatg
ccgagacctgttctggtgaaaaacaccatgttagcagatttgatagaggaactgaagaag
actggagtccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatttctgctctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcttct
tactgtgagaaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggacacaacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaaccgtgaaggacagtgagaagatc
ttcactcagatgatccgtctcatccagaaaagaagctgtgatgtaaagaaacaaatccga
tcccagcggcaaacagaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcaaagctc
agagacaaactgcaagaacttctgagagaggaatggacaaacatctcagcgacagtcact
catgtggatgttttactgccagaaccagaaccaaagagcagagatggcttcttaaaatat
tcacgtcaaatctcactggatccaaacacagcacacagacaactgttactgtcagagaac
agaaaggtgatgtttatggaacgacctcagtcttattctgatcatccagacagatttact
caatattatcaggttctgagtagagagagtctgactggacgttgttacttcgaggtggag
tggagagaaaaagttgatgtagcagtcacatacaagaacatcagtagatctggaaatgaa
agtggatttggttttaacaatcagtcgtgggtattgagttgttctacaaatagtttagca
tgtttccacaacagcattcaaactcccatctcagctcctggttcctccagagtaggagtg
tacctggatcacagagcaggtgttctgtccttctatagcgtctctgaaagcatgactctc
ctccacagagtccagaccacattcactcagccgctccatgctggagtgtggttgtataaa
actggagtctcagcagagttctgtacactcaaatag
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