Oryzias melastigma (Indian medaka): 112158146
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Entry
112158146 CDS
T07439
Symbol
lama4
Name
(RefSeq) laminin subunit alpha-4
KO
K06241
laminin, alpha 4
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04510
Focal adhesion
oml04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112158146 (lama4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
112158146 (lama4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_EGF
Laminin_II
Laminin_I
Laminin_G_3
Tox-REase-2
Motif
Other DBs
NCBI-GeneID:
112158146
NCBI-ProteinID:
XP_024147137
LinkDB
All DBs
Position
LG24:23992073..24024738
Genome browser
AA seq
1870 aa
AA seq
DB search
MASKCLSGFCLLGILFGIVCSTSAVRMREQQQTLLRVCEKGSFLSEQGECLPCNCKGNAD
SCEDITGVCINCRDHSTGDFCEMCEEGYTLSVSLNGRHHCQPCSCPLSSPSNNFAVRCEK
GGVTLRCICQEGYAGHYCERCAPGYYGNPMVIGDSCKRCDCNGNSDPNLIFSECHNVTGH
CQHCWGNTAGTNCERCAPGYYGDAIDSKNCRECKCNKCGTSSCNDRTGVCHCKPGVTGPL
CDHCEEGYSGFSSCQGCRRCECGPASLRPTCHPLTHSCLCRPGAGGRYCERCLPGYWDYS
PSGCQKCDCTSGHCDMQTGECLTEATISMCNNSCDDCIWQLIGDLKLSNKTLDELKVTVL
NISTGAAANDRLKYYNYTAHQLQTQFQAWRKKSSALKAKPVELGKSADSTELNIRELEES
EKVLKKVGRELDESSLQTFTRAQQLSTNLPDLNHLIEEMIHDWEVYSVQQDIDPEEKRRN
LELVQQMLSWMRQLDVSQQLPVAKNESTEAHDLLRRIHQLEKKLKVTGNRLAPVRELMSR
FSARLTEAQDFLLRATSTLEESKDKNRANIDQLHRKKAKQQRFAKDTLDVNITLETSRVF
LIETEQTVADLEALVQNVTEYHAAIDGAGQRLVEKTERLMLVDRDLVQRADEHAQNMEQD
ANMLEEDLRESDANGFVQRAISAVNVYNNIVKYIEDANVTSRTTLNLAQRAEDAITGINA
QLDYLVTQSDNVFKESVSLFSEKTEVEREAIDKIKYIEETREIMDKNTKKLKEMGQDISE
IHTDKTRRRLDFTSQVADRTLNRSAEVLQTVTPINDKVEEWDSNMKKNKYSVAAYEQAVV
SAGKAVERLNELVPELLNRLKVVENKKPVNNVTTNIVRIRELIAQARSVAKKVQVSMKFD
GQSSVEVHPHSNLDDLKTVTSISLFMRVDPDKDPIEDRFVLYLGDKNGSKDYMGLAIKSD
NLVFVYKLGGEEVEISLTSKPVSQWPAVFNYIKVERLGRHGKLFLTIPSQNSRDEQKFIQ
KGEAPGKESLFDLDPKGTVFFVGRVPPDVTLPPLLSLAPFVGCIELASLNNDVISLYNFK
KIYPTNNLLPPCPRYKLAFSQSRIASYLFDGTGYALINNIERKGKFGTVTRFDIAVRTVA
NSGIIFLMVNGDKFFLLEIKDGFLRLTYDFGFSSGPILLENNSPKFQINDARYHEMSVIY
HQSKKVILLVDKSHVKTMENPKTTLPFSDIYIGGAPSSILKARPELSSVVGLKGCVKGFQ
FLKKDFNLLEEPGTIGISSGCPEESFMSRNAYFTGSGYLGSTAKISPFDNFEGGMNFRTL
QPNGLLFYHNEESSEFSISVENGAVVLNCKGTKVKSHKKQYNDGRTHFLMASVNKQLFSL
MVDDKDKRENKRPSSATKVPVDSPMKTFYFGGSPNSSFKNFSGCISHVYISRQDQDIEAE
DFQKYTEKVQTSLQDCPVVSPPAAHLFRHRNGTFGTKQTQKVTRDLIGDQRRDEHEESEP
NMEPCFLSNSPRGLQEAFHYGTTANSRQHYTNIPDSLSKRFNFSMSLKTQSSFGLIFYIS
DSHENNFIALFLSHGKIVYAFNVADQRVKISSKGRLDDGAWHHINLSRDGSLGHLTVDGL
KNLEGRARRRNDPWQISRPLFIGGVFPGLALKNVPRNSALSFTGCLKDLKLNEMKLSTPA
ETFGVTPCFEGHSEPGTYFSEEGGYLILDKSHQLGLKFELVMELRPRVASAVLLHARSSE
QFFTLYIHQGAVVVLIKDGPHEFFTKVSPRRGVCDGAWHRITVIRDVGILQLNVDSEISH
VVGQVKTSSADSEQLVVIGGFPNHFPTDNIATRNSFVGCMKNLSINNSPVSFSKAALVSG
AVNVGTCPAA
NT seq
5613 nt
NT seq
+upstream
nt +downstream
nt
atggcttctaaatgtttgtctggcttctgcctgctgggcatcctctttgggattgtgtgt
tcaacttctgccgtcagaatgagggagcagcagcagactttgctcagggtttgtgagaaa
ggatctttccttagcgaacaaggagaatgtctgccttgtaactgcaaaggcaatgctgac
tcctgcgaggacatcacaggtgtctgcattaactgtagggaccacagcacaggggatttc
tgtgagatgtgtgaggaaggctacaccctctctgtgagtctgaatggacgtcaccactgc
cagccctgcagctgccccctctccagcccatccaacaattttgctgtgcgctgtgaaaaa
ggaggcgtcactctaagatgcatctgccaggagggctatgctggacactactgtgagagg
tgtgcacccggatactacggcaacccaatggtgattggtgactcttgcaagaggtgtgac
tgtaacggcaattccgaccccaacctgatcttcagtgagtgccacaatgtgaccggccac
tgtcagcactgctggggtaacaccgccggcaccaactgtgagcgctgcgcccccggttac
tatggcgatgccattgacagcaaaaactgcagagagtgcaagtgcaacaagtgtggcacg
tcctcctgcaatgacaggacaggtgtttgtcactgcaagccgggagtaactggacctctc
tgtgatcactgcgaggagggttactctggtttctccagctgtcagggctgccggaggtgt
gaatgcgggccggcttcccttcgccccacctgccatcctctcacccacagctgtctgtgc
cgccccggagccggaggccgttactgtgagcgctgcctgccaggatactgggattacagc
ccttccggctgccagaaatgtgactgtacgagtggccactgtgacatgcaaacaggagaa
tgtctgaccgaagcaacaatcagcatgtgtaacaacagttgtgatgactgcatctggcag
ctgatcggagatttgaagctttccaataagactctggatgagttaaaggttactgtgtta
aacatctccactggtgctgcagccaacgacagactgaaatactacaactacaccgctcat
caactccagacacagtttcaagcttggagaaagaagtcttctgcattgaaggccaagcct
gtggagctggggaaatctgcagactctacagagctgaacatcagagagctggaagaatcg
gagaaagtgctgaaaaaggttgggcgggaactggacgagagctctctgcagactttcacc
agagcacagcaactcagcaccaacctccctgatctcaaccatctcatcgaagagatgatc
catgactgggaggtgtacagtgttcagcaggatatcgatccagaggaaaagaggcgtaac
ttggagttggtgcagcagatgctcagctggatgaggcagctcgacgtgtcacagcaacta
cctgtcgccaagaacgagtcgactgaggcccatgatttgctaaggcgcatccatcagctg
gagaagaagctgaaagtcaccgggaaccgcctcgctcctgtcagggagctcatgtctcgc
ttctccgccaggctgacagaggctcaagactttctcctgagagccaccagcacactggag
gagagcaaagacaaaaacagggccaacatcgaccagctacacaggaagaaggcgaagcag
cagaggtttgccaaggacactctggatgtcaacatcaccctggagaccagcagagttttc
ctgattgaaactgagcagacagtggcagacctggaggctttggttcagaatgtgacggag
tatcatgctgccatcgatggtgctggccagaggctggtggagaagacggagcgcctcatg
cttgtggacagggatctggtccagagagctgatgagcacgctcagaacatggagcaagat
gccaacatgctggaggaggatttgagagaaagtgatgccaatggttttgttcagagagcc
atcagcgccgtcaacgtctacaacaacatagtgaaatacatcgaggatgccaacgtcaca
tcccgcaccacccttaacttagctcaaagagctgaagacgccatcacagggataaatgcg
cagctggattacctggtgacacaaagtgacaatgttttcaaggagtcggtttctctgttt
tcagaaaaaactgaggtggaaagagaagcaatcgacaaaataaagtatattgaggagact
cgggagattatggacaagaacaccaaaaaactcaaagaaatggggcaggacatcagtgaa
attcacaccgataaaacacggcggcgattggattttacctctcaagtagctgacaggact
ttgaaccgctcagctgaagtgcttcagacggtcacccccatcaacgacaaggtggaggag
tgggacagcaacatgaaaaagaataaatactctgtggctgcatatgaacaggctgttgtc
tcagcagggaaagctgtggagaggctgaatgaacttgttcctgaactgctgaacagactc
aaggttgtagagaacaagaagccagtgaataatgtaactaccaacatcgtgaggatccgg
gagctcattgcccaagccaggagtgtggccaagaaagttcaagtctccatgaagtttgat
ggacaatcttctgttgaggttcatcctcacagcaacctggatgacttgaagaccgtgact
tccatcagtctgttcatgagggtggatccagacaaggaccccattgaggaccgatttgtc
ttgtatctgggagataaaaatggatcaaaagactacatgggcttagccatcaagagcgac
aatctggtgtttgtttataaacttggaggagaagaagttgagatctccctcacctcaaag
cctgtcagccaatggcctgcagtctttaactacatcaaagttgaacggcttggcagacat
ggtaaactcttcctgactataccaagccagaactccagagatgagcaaaagttcattcag
aaaggtgaagctccaggcaaagaatctctgtttgacctggaccccaaaggcactgtcttc
tttgttggcagagtcccgccagatgtcacgctgccacctcttctgagtcttgctccgttt
gtgggatgcattgagttggcttctctgaacaatgatgtaatcagtctgtacaatttcaag
aagatttacccaacaaataatttactacctccatgcccaaggtacaagttggccttctct
caaagtcgcattgcaagctacctgtttgatggaactggttatgctctcataaataacatc
gagaggaaagggaagttcggcaccgtaacaagatttgacattgctgtgcgaacagttgca
aacagtggtatcattttcctaatggtcaatggggataaattcttccttctggagataaag
gatggctttttgcgactgacgtatgactttggcttcagcagcgggccaatacttctggaa
aataattcaccaaagtttcagataaatgatgctcgataccatgagatgtcagtgatttac
caccagtcaaagaaggtcattctgttagtggacaagagccacgtcaaaacaatggagaat
cccaaaaccacgctgcccttctctgacatctacattggtggggctccctccagtatcctc
aaagccaggcctgaactgtcctctgtggttggcctgaagggctgtgtcaaagggttccag
ttcctgaagaaagacttcaaccttctggaggagcctggcaccattggaatcagcagtggt
tgcccagaggagtcctttatgtcccgtaatgcctattttaccgggagtgggtacttggga
tccacagcaaagatctctccttttgacaactttgagggaggaatgaactttagaaccctg
cagcccaatggcctcctattctaccacaatgaagagtccagcgagttcagcatctctgtg
gagaacggcgcagtagtgttgaactgcaaaggcacaaaggtcaaatcccacaaaaagcaa
tacaatgatggaaggacacacttcttgatggcttcagtgaacaagcagcttttctctctg
atggtggatgataaagacaaacgggagaacaaacggccttcatcagccacaaaggtccct
gttgattctcccatgaagactttctactttggaggctctccaaacagcagttttaagaac
ttcagtggctgtatcagccatgtttacatcagcaggcaggaccaggacattgaagcagag
gatttccaaaagtacacagagaaggtccaaacatctctacaggactgtccggtagtgagt
cctccagcagcacatttgtttaggcacagaaatggtacttttggaaccaaacagacacag
aaggttaccagagatctcattggtgaccaaaggagggatgaacacgaggaatcagaacca
aacatggagccctgtttcctctccaatagtcccagaggactgcaggaagccttccattat
ggaaccactgccaacagcaggcagcactacacaaatatccccgactctctttccaagagg
ttcaatttttccatgtctctgaagacccagtcatcctttggcctcatcttttacatatca
gatagccacgaaaacaactttattgcgctgttcctgagtcacggtaaaattgtctatgcc
ttcaacgtagcagaccagagagtgaaaatcagcagtaagggcagacttgatgatggcgca
tggcaccatataaacctcagccgtgatgggagtcttgggcacttaactgttgatggactc
aaaaacctcgagggcagagctcgaagaagaaatgatccttggcagatcagccgccctctg
ttcatcggtggagtttttccagggttggctctaaagaatgtcccgagaaactcggcgctc
agctttactggctgtttgaaggatctgaagctgaatgaaatgaaactgtcgactccagca
gagacgtttggggtcaccccatgctttgagggacattctgagccaggaacatacttttca
gaggaaggaggatatctgatactggataaatcacaccagttggggctgaagtttgagctg
gtcatggagctccgccctcgtgtggcttctgctgtgttactgcatgctcgctcatcagaa
caattcttcactctgtacatccatcagggcgcggtggtggttctcataaaagatggccct
catgagttcttcacaaaagtgtctccaaggcgtggtgtgtgtgatggcgcatggcacaga
attacagtgatccgagatgttggcatcctccagctgaacgttgactctgagatcagtcat
gttgtgggacaggtgaagaccagctctgcagactccgagcagttagtggtaataggtgga
ttcccaaatcacttccccacagacaacattgccaccaggaattcctttgtgggctgcatg
aagaatctgagcatcaataacagtcctgtcagcttcagcaaagcagctctggtcagcgga
gctgtcaatgtgggaacctgcccagcggcatga
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integrated database retrieval system