Oryzias melastigma (Indian medaka): 112159520
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Entry
112159520 CDS
T07439
Symbol
raf1a
Name
(RefSeq) raf-1 proto-oncogene, serine/threonine kinase a isoform X1
KO
K04366
RAF proto-oncogene serine/threonine-protein kinase [EC:
2.7.11.1
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04010
MAPK signaling pathway
oml04012
ErbB signaling pathway
oml04068
FoxO signaling pathway
oml04140
Autophagy - animal
oml04150
mTOR signaling pathway
oml04210
Apoptosis
oml04218
Cellular senescence
oml04270
Vascular smooth muscle contraction
oml04370
VEGF signaling pathway
oml04371
Apelin signaling pathway
oml04510
Focal adhesion
oml04540
Gap junction
oml04625
C-type lectin receptor signaling pathway
oml04810
Regulation of actin cytoskeleton
oml04910
Insulin signaling pathway
oml04912
GnRH signaling pathway
oml04914
Progesterone-mediated oocyte maturation
oml04916
Melanogenesis
oml05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
112159520 (raf1a)
04012 ErbB signaling pathway
112159520 (raf1a)
04370 VEGF signaling pathway
112159520 (raf1a)
04371 Apelin signaling pathway
112159520 (raf1a)
04068 FoxO signaling pathway
112159520 (raf1a)
04150 mTOR signaling pathway
112159520 (raf1a)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
112159520 (raf1a)
09143 Cell growth and death
04210 Apoptosis
112159520 (raf1a)
04218 Cellular senescence
112159520 (raf1a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
112159520 (raf1a)
04540 Gap junction
112159520 (raf1a)
09142 Cell motility
04810 Regulation of actin cytoskeleton
112159520 (raf1a)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
112159520 (raf1a)
09152 Endocrine system
04910 Insulin signaling pathway
112159520 (raf1a)
04912 GnRH signaling pathway
112159520 (raf1a)
04914 Progesterone-mediated oocyte maturation
112159520 (raf1a)
04916 Melanogenesis
112159520 (raf1a)
09153 Circulatory system
04270 Vascular smooth muscle contraction
112159520 (raf1a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
112159520 (raf1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oml01001
]
112159520 (raf1a)
Enzymes [BR:
oml01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
112159520 (raf1a)
Protein kinases [BR:
oml01001
]
Serine/threonine kinases: TKL group
RAF family [OT]
112159520 (raf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
RBD
C1_1
Kinase-like
zf-RING-like
ABC1
Pkinase_fungal
C1_2
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
112159520
NCBI-ProteinID:
XP_024149403
Ensembl:
ENSOMEG00000007930
LinkDB
All DBs
Position
LG7:13739707..13753185
Genome browser
AA seq
677 aa
AA seq
DB search
MEHLQGAWRTLSNGFGMKDSAFEGPCLSPTMVQAFPCQRRSSDDSRTPDSKASSTIRVYL
PNQQRTVVNVRPGMTLFNCLIKALKVRGLQPQCCAVFRLHPGQTNKKLRMDWNTDSTSLI
GEELLVEVLDHVPLTTHNFVRKTYLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKVPT
MCVDWSNIRQLLLCPTPGEGSGPSLPPPTSRRVRDSLTRFPSSAHRFSTSHAFSDTEPYT
PPGGGLSQRQRSTSTPNVHMGSTTLPVDSSMIELDCLNTSASSWCHRFWLKRKVGIVHLP
QTFVEASSESPEKDAMRDHDSAGSSPNQSPTGWSHSQSKTPTPAQRERAPSFNTQEKNKI
RPRDKRDSSYYWEIEASEVYLHSRIGSGSFGTVYKGKWHGDVAVKILKVTDPTPEQFQAF
RNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHIHVLETNFKMIQLIDIAR
QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKARWSGSHQVEQPSGSIL
WMAPEVIRMEDNNPYSFQSDVYSYGIVLFELMTGELPYSQIANRDQIIFMVGRGCLSPDL
SKLYKNCPKAMKRLVADCIKKSKDERPLFPQILSSIELLQHALPKINRSASEPSLHRASH
PEDINTYTLTSTKLPVF
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagcaccttcagggggcctggaggaccctgagcaacggctttggaatgaaggactcg
gcattcgagggcccctgcctctcccccaccatggtgcaggcttttccctgccagcggcgc
tcctcggacgacagcaggacaccagactccaaggccagcagcacaatccgcgtctacctc
cccaaccagcagcgcactgtggtaaacgtacgaccgggtatgactcttttcaactgcctc
atcaaagcgctgaaggtgcgaggcctgcagcctcagtgctgcgccgtcttcaggctacat
ccaggacagaccaacaagaaattaaggatggactggaacaccgactcgacctctctgatc
ggagaagagctgctggtggaggttttagatcacgttcccttgacgactcataactttgtt
cgtaaaacatatctcaagctagcattctgtgacatttgccagaagtttctcttgaacgga
ttccgctgccaaacctgcggctacaaattccacgagcattgtagcaccaaagtgcccaca
atgtgtgtggactggagcaatattaggcaactcctgttgtgtccgacgccgggggagggc
agtggtccgtccctgccgccgccaacgtcccggcgtgtcagggactccttaactcgattt
ccaagctccgcccaccgattctccacctcccacgccttcagtgacacagagccctacacg
cccccgggcggaggtctctcccagaggcagcgctccacttctacacccaacgtccacatg
ggcagcaccactctgcctgtagacagcagcatgatcgagctagactgcctgaatacctct
gccagctcctggtgccacagattctggctgaagaggaaagtaggtattgtgcacctcccc
cagacttttgtggaggcctcatctgagagtccagaaaaggatgcaatgcgagaccatgac
tcggcggggagttcacctaaccagagccccacaggctggtcccattcacaatccaagacc
cccacgcctgctcagagggagagggctccatccttcaacactcaggagaaaaataagatt
aggcctcgagacaagcgcgactccagctactactgggagattgaagccagcgaggtgtac
ctgcactcacgcatcggttcaggctcctttggaactgtgtacaaaggaaaatggcacggc
gatgtagcagtaaagattttaaaggtgactgaccccacaccggagcagttccaggcattc
agaaatgaagtggcagtcctgaggaagacgcgacacgtcaacatccttttgttcatgggc
tacatgacgaaggacaacctggccatcgtgacccagtggtgcgagggcagcagcctctac
aaacacattcacgtcctggagactaacttcaagatgatccagcttatagatatagccaga
cagacagctcagggcatggactatcttcatgctaagaacatcattcaccgggacatgaag
tctaacaacatcttcttacatgaaggactaacagtgaaaattggggactttggtcttgca
acagtgaaggccagatggagcggctcacatcaggtggagcaaccttccggatccattctt
tggatggctccagaggttatccggatggaggataataacccctacagtttccagtctgac
gtatattcctatggaattgttctctttgagctcatgacaggagagctcccgtactcacag
atcgcaaacagagatcagatcatttttatggtaggaagaggctgtctgtccccagacctc
agcaagctctacaagaactgccccaaagccatgaaaaggttggtggccgactgcatcaag
aagtccaaggacgagaggcctctcttcccgcagatcctgtcctccatcgagctgctgcag
cacgccctcccgaagatcaaccgcagtgcctcggaaccgtccttgcacagagcctcccac
cccgaggacatcaacacctacactctgacttccaccaaactgcccgtcttttga
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