Oryzias melastigma (Indian medaka): 112159564
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Entry
112159564 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112159564
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112159564
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-B_box
SPRY
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Prok-RING_4
U-box
ToxN_toxin
Motif
Other DBs
NCBI-GeneID:
112159564
NCBI-ProteinID:
XP_024149489
LinkDB
All DBs
Position
LG17:complement(17494163..17497505)
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AA seq
555 aa
AA seq
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MSQQGNQIDEERFSCSICLDLMTDPVTILCGHSYCMKCIQGFWDGEENIHSCPQCRKTFI
PRPALVKNTMLADLIEELKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLFCLAS
YCEKHLQPHLDEVAFKKHKLEEPSKNLQENICPIHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVLAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVEAINHSADQTVKDSEKI
FTQMIRLIQKRSCDVKKQIRSQRLTEVSRVKDLQKEFKREISELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEDVTAAVSELTDKLKDILRDEWTNISPTVT
HVDVLLPEPESEPEPTSRADFLKYSCQITLDPNTAHRRLLVSEENRKVRLMEEPQSDSDH
RDRWFQVLSRETLTGRCYWEVEWRGKFVYVAVAYENIIRSEYDSRFGFNDKSWALSLSPD
KFSFLHKEIQTTTLARVSSRVGVYLDHTAGVLSFYSVSESMTLLHRVQTTFTQPLYAGVW
LGHAVGDTAEFCKLK
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagcaaggaaatcaaatcgacgaagaaagattcagctgttccatctgtctggat
ctaatgacggatccggtgactattctgtgtggacacagctactgcatgaagtgtattcaa
ggattctgggacggagaggagaatatccacagctgtcctcagtgtaggaagaccttcata
ccgagacctgctctggtgaaaaacaccatgttagcagatttgatagaggaactgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatttctgctctggaagaaaactgaaagcaatcaagtcctgtttgttctgtctggcctct
tactgtgagaaacaccttcaacctcatttggatgaagttgcattcaagaaacacaagctg
gaggaaccctccaagaacctgcaggagaacatctgccccattcatgatgaggtgatgaag
atgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggacacgacacagtcttagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtggaggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactcagatgatccgtctcatccagaaaagaagctgtgatgtgaagaaacaaatccga
tcccagcggctaactgaagtgagtcgagtcaaagatcttcaaaaagaatttaaaagggag
atcagtgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggatgtgacagcagctgtgtcagagctc
acagacaaactgaaggacattctgagagatgaatggacaaacatctcaccgacagttact
catgtggatgttttactgccagaaccagaatcagaaccagaaccaacgagcagagctgac
ttcttgaaatattcatgtcaaatcacactggatccaaacacagcacacagaagactgtta
gtgtcagaggagaacagaaaagttagattgatggaagaacctcagtctgattctgatcat
cgagatagatggtttcaggttctgagtagagagactctgactggacgttgttactgggag
gtggagtggagaggaaaatttgtttatgtagcagtcgcatatgagaacatcatcagatct
gaatatgacagcagatttggttttaatgacaaatcttgggcattaagtctttctcctgac
aaattttcatttcttcacaaagagattcaaaccacaaccttagcccgtgtttcctccaga
gtaggagtgtacctggatcacacagcaggtgttctgtccttctacagcgtctctgaaagc
atgactctcctccacagagtccagaccacattcactcagccgctctatgctggagtttgg
ttgggtcatgctgttggagacacagcagagttctgtaaactcaaataa
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