Oryzias melastigma (Indian medaka): 112159565
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Entry
112159565 CDS
T07439
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112159565
Ubiquitin system [BR:
oml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112159565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
SPRY
zf-C3HC4_3
zf-RING_2
U-box
Prok-RING_4
zf-RING_5
FYDLN_acid
Gp58
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
112159565
NCBI-ProteinID:
XP_024149490
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Position
LG17:complement(17507739..17510501)
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AA seq
553 aa
AA seq
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MAEKGNDLDQERFCCSICLDVLQDPVTIPCGHSYCMKCIQRFWNKEKKIFSCPQCRKTFT
PRPGLEKNIMLADLVEEVKKTGLQAAPADHCYAGPEDVSCDFCSGRKLKAIKSCLICLAS
YCEKHLQPHLDEAAFKKHKLVEPSKNLQENICSIHDEVMKMFCRTDQKCICYLCSVDEHR
GHDTVSAAAERTERQRDLEESQQQIQQRIQDREKEVKLLQQEVGAINHSADQTVKDSEKI
FTQMTRLIQKRSCDVKQQIRSQQLTEVSRVKDLQEELEQEITELKRRDAELKQLSLTEDH
SQFLLNYPSLPPLSESTHSSSINVRPLRYFEEVTAAVSELRDKLKDILREERTNISPTFT
RLNVIPPLPKPRNRAHCLKYSHQITLDPNTAHRQLLLSEENRKVMFLKKSQSDSDHPDRF
TDWFQVLSRESLTGCCYWEVEWRGDYVNVAVAYRNISRTGHESDFGFNDKSWSLVCSPKT
FSFLHNSIRISISAPVSSRVGVYLDHRAGVLSFYNVSESMTLLHRVQTTFTQPLHAGLRL
FSVGTTAQFCKLK
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaaggaaatgatttggatcaagaaaggttctgttgttccatctgtctggat
gtcctgcaagatccggtgactattccctgtggacacagctactgcatgaagtgtattcaa
agattctggaataaagagaaaaaaatcttcagctgtcctcaatgtaggaagaccttcaca
ccgagacctggtctggaaaaaaatatcatgttagcagatttagtggaggaagtgaagaag
actggactccaagctgctcctgctgatcactgctatgctggacctgaagatgtgtcctgt
gatttctgctctggaagaaaactgaaagccatcaagtcctgtttgatctgtctggcctct
tactgtgagaaacaccttcaacctcatttggatgaagctgcattcaagaaacacaagctg
gtggaaccctccaagaacctgcaggagaacatctgctccattcatgatgaggtgatgaag
atgttctgtcgtactgatcagaagtgtatctgttatctctgctctgtggatgaacataga
ggacacgacacagtctcagctgcagcagaaaggactgagaggcagagagatctggaggag
agtcaacaacaaatccagcagagaatccaggacagagagaaagaggtgaagctgcttcaa
caggaggtgggggccatcaatcactctgctgatcaaacagtgaaggacagtgagaagatc
ttcactcagatgacccgtctcatccagaaaagaagctgtgatgtgaagcagcagatcaga
tcccagcaactaactgaagtgagtcgagtcaaagatcttcaggaggagctggagcaggag
atcactgagctgaagaggagagacgctgagctgaagcagctctcactcacagaggatcac
agccagtttctgctcaactacccctcactgccaccactcagtgagtccacacactcatcc
agcatcaatgtccgtcctctgagatactttgaggaggtgacagcagctgtgtcagagctc
agagacaaactgaaggacattctgagagaggagcggacgaacatctcaccgacattcact
cgtttgaatgttattccaccactgccaaagcctaggaatagagctcactgcttaaaatat
tcacatcaaatcacactggatccaaacacagcacacagacaactgttactgtctgaggag
aacagaaaggtgatgtttttaaaaaaatctcagtctgattctgatcatccagacagattc
actgactggtttcaggttctgagtagagagagtctgactggatgttgttactgggaggta
gagtggagaggagactatgttaatgtagcagtcgcatacaggaacatcagtagaactgga
catgaaagtgattttggttttaatgacaaatcttggtcattagtctgttccccaaaaact
ttctcatttttgcacaacagcattcgaatatccatctcagctcctgtttcctccagagta
ggagtgtacctggatcacagagcaggtgttctgtccttctacaacgtctctgaaagcatg
actctcctccacagagtccagaccacattcactcagccgctccatgctggactgaggttg
ttttctgttggaactacagcacagttctgtaaactcaaatag
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