Oryzias melastigma (Indian medaka): 112161194
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Entry
112161194 CDS
T07439
Symbol
cylda
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04217
Necroptosis
oml04622
RIG-I-like receptor signaling pathway
oml04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
112161194 (cylda)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
112161194 (cylda)
04625 C-type lectin receptor signaling pathway
112161194 (cylda)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112161194 (cylda)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112161194 (cylda)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112161194 (cylda)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C67
112161194 (cylda)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112161194 (cylda)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CYLD_phos_site
CAP_GLY
UCH
Motif
Other DBs
NCBI-GeneID:
112161194
NCBI-ProteinID:
XP_024152018
Ensembl:
ENSOMEG00000016155
LinkDB
All DBs
Position
LG3:complement(27615515..27637548)
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AA seq
957 aa
AA seq
DB search
MSSALWNQDRSGGGFREDWRFYMVIKECTVEKPAQKTLRIPRGSLGQACQERNSLGRTLP
PCKGKKSLRILDQTNVVLSLDERDVLELEEKLAELLFPITNCEERYALLCDESRLQRVRD
IDCGSKVRVQLRSGDEPLPGVVRFKGSLLPDRALSGIWFGVELLEEGRGQGFTEGSYQGR
QLFRCEEECGVFVALDKLELWEDDDDETVGELEVDHLSLVEDDQDFPPLEINSRVVVQTR
EGPERGTIIFCGLLPSNESLGYYVGVDMDNPIGDWDGMFHGKLLCNFASLEHTRLVPICD
VMPEYSMQDQRLPRHSFALGGTNSDKSSSGPNKPNKKGLSHQTGSRSKSEFYYTLNGSSL
DPPSQSKSKSTWYIDEVGEDPAKSLTETPPDFNQSSPPPRAPLSSSLSTDNKFHSLPFSL
NRKPGPADSISPGPLSLSVQSVMGEQPEPPTAPAAPPSPRPSTPPRGQPGLEVGSLVEVK
ENPPLCGVIRWVGLPPGLLEPLAGLELEEECPGCTDGTFKGTRYFTCPPKKALFVKLKCC
RPDSRFPSLHHSPNPIERCNSIAFGGYLSEVVHENTPPRTENDGLDVMVGKKKGIQGHYN
SCYLDSTLFCLFSFSSVLDTVLLRPQSKTDVEYYRETQELLRTEIVNPLRIHGYVCATKV
MKLRRILEKVEAASGFTSEEKDPEEFLNILFHHILRVDPLLKLRSAGQKVQDCYFYQIFM
DKKDKVGVPTIQQLLEWSFINSDLKFAEAPSCLIIQMPRFGKDFKMFNKIFPSLELDITD
LLEDTPRECRICGGLAFYECRDCYEDGDITAGKIKQFCEKCNTQVHLHPKRKAHRHGKLS
VPKELQEGMGRQGGFPRQRMELFAVLCIETSHYVAFVKYGNADSAWLFFDSMADRDGGQN
GFNIPQVSPCPEVETYLKMTPEELHTLDPKSIQGQARRLLCDAYMCMYQSPTMSLYK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgccctgtggaaccaggataggtctggtgggggcttcagggaagactggcgc
ttctacatggtcataaaagaatgtactgtggagaagcctgcacagaagaccctgaggatc
ccccgtggtagcctgggccaggcctgtcaggagcgtaacagcctgggacgaactctccct
ccatgcaagggcaagaaaagcctccgcatcctggaccagaccaacgtggtcctcagcctg
gatgagcgggatgtgttggagctggaggagaagctggctgagctgctgttccccattacc
aactgcgaggagcggtacgccctgctgtgcgacgagtcgcgcctgcagcgggtacgtgac
atcgattgtggttccaaggtgcgtgtccagctgcggtcaggggatgagcctctgccaggg
gtggttcgcttcaaaggctcactgctgccagacagagccctgtcgggaatctggtttgga
gtggaactactggaggagggtcgaggccagggcttcacggagggctcctaccagggtcgc
cagctttttcgctgcgaggaagagtgcggcgtgtttgtggctctggacaagcttgaactc
tgggaggacgatgacgatgaaacagtgggggagctggaggtggatcacctcagcctggtg
gaagacgatcaggactttcctcctctggagattaactccagggttgtggtgcagaccaga
gagggaccagagaggggcaccatcattttttgtggcctgctacccagcaatgagagctta
ggatactatgtaggagttgacatggataatcctatcggggactgggatggtatgtttcac
gggaagctgttgtgtaactttgccagtttggaacacactcgacttgtccccatctgtgac
gtaatgccagaatattccatgcaggaccaaaggctgccgaggcacagttttgccctcgga
ggcaccaacagtgacaagtcatcctctggccccaacaaaccaaataaaaaaggattaagt
catcaaactggaagtagaagcaagtctgaattttactatactttaaatggcagctctctt
gacccgccatcccagtccaaatccaaaagcacatggtacattgatgaagttggagaggac
cctgccaagtcactcaccgagaccccccctgacttcaaccagtcctccccgccccccaga
gccccactttcctcttcactctccaccgataacaagttccactcgctgcccttcagcctg
aaccgcaagccggggcccgccgacagcataagccccggtccgctctccctctctgtccag
tcagtgatgggagagcagcccgaacccccgacagctccggccgccccgccttctccacgg
ccttcaacgcctcctcgaggacagcccggtctggaggtgggctctctggtggaggtgaag
gagaacccccctctgtgtggcgtgatccgctgggtgggtctgccccctggtctgctggag
cccttggcggggctggaactggaagaagagtgccccggctgcactgacggcaccttcaaa
ggtacccggtatttcacctgcccccctaagaaagctctgtttgtcaagctcaagtgctgt
cggcccgactcccgcttcccgtccctgcaccactcccccaaccccatagagcgatgcaac
tcaatcgcatttggaggttacctgagcgaggtcgttcacgagaacacgcctccacgcaca
gaaaacgatggcctggatgtaatggtggggaaaaagaagggcatccagggtcattacaac
tcctgctacctagattcgaccctcttctgtctcttctccttcagttcggttttggacacg
gttctactgaggccacaatcaaagactgatgtggagtattacagggagacccaggagctg
ctacgcactgagatagtgaaccccctacgcatacacggttatgtttgtgccacaaaagtg
atgaagctgaggaggattctagaaaaagtggaggcagcttctggatttacctctgaagaa
aaagatcctgaagagttccttaacattcttttccaccacatattaagagtggatccactg
cttaagctaagatcagcaggccagaaggtccaggactgttacttttaccagatcttcatg
gacaagaaggacaaggttggagttccaaccatccagcagcttctagaatggtccttcatc
aacagcgatctcaagtttgcagaggctccctcctgccttatcatccagatgccccgcttt
ggcaaggacttcaaaatgttcaacaagatttttccttccttagagttggacatcacggat
ctccttgaagacactcccagggaatgtcgtatctgtggaggcctggcgttctacgagtgc
agagactgttatgaagatggggacatcactgctggcaagattaagcagttctgtgaaaag
tgtaatacacaggttcacctccacccaaagaggaaagcccatcgacacggcaaactgtcc
gtccccaaggagctgcaagagggcatggggcgtcagggcggctttccccgccagaggatg
gagctgttcgctgtgctatgcatcgagaccagtcactacgtggccttcgtcaagtacggc
aacgcagactccgcctggctcttcttcgacagtatggccgaccgtgacggggggcagaat
ggtttcaacatcccgcaggtgtctccctgccccgaggtggagacgtacctgaaaatgact
ccggaagaactgcacactctcgaccccaagagcatccaggggcaggcgcgccgcctgctc
tgcgacgcctacatgtgcatgtaccagagtccaaccatgagcctgtacaagtaa
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integrated database retrieval system
