Oryzias melastigma (Indian medaka): 112161203
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Entry
112161203 CDS
T07439
Symbol
gpc5a
Name
(RefSeq) glypican-5a
KO
K08111
glypican 5
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
oml00535
]
112161203 (gpc5a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112161203 (gpc5a)
Proteoglycans [BR:
oml00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
112161203 (gpc5a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Others
112161203 (gpc5a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
Motif
Other DBs
NCBI-GeneID:
112161203
NCBI-ProteinID:
XP_024152030
Ensembl:
ENSOMEG00000016971
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All DBs
Position
LG3:14030619..14173243
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AA seq
564 aa
AA seq
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MAVLWTCCFLLACCSVSALGSPKNCEEVHKVFMAFGPSQFPLGPTTGKDLQVCISKNSTC
CTKKMEEKYQVLARRDIQDLLQTSSSGLKLLISRYVAAFQETFEVLIRQAENHTNTIFQE
SYPSMADQAVGAVRELFTDVGLFLLGSELSVDELVQRFFDALFPLVYKHLINSGRGDVSP
GYAECVRSLSRDVRPFGAAPGLLADQITSSGVSGKLLLQALHLSIEVINTTDHLQLSREC
RRALLKMQFCPHCQGLTQSKPCRGYCLNVMRGCLASMAEIDTHWREFVSSLEGLSARMHG
TLDLEQVLLGVHTLLHDAVGHALRNGASISKQVQKSCGSPSRRPAESVSVHHGSRRASLP
LQAPVKATGEAFTSKRRDFLRTLRPYSTFYGGLADQLCDRHLSSGEGRLCWNGTSMVQSY
TVRVVGSGVRAQSTNPEVKVKGIDPVINQIIDKLRHINQLLQGKSIPKLGSLDQIETGSG
DTEGRYSGECDDEDGCAGSGGGESRTKVSKVHKMVPDVISDYKHHNHHPPFARDPEIGSR
SSSLRLIGAIWVPVLPCLHMLLIW
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctgtggacatgctgctttctcctcgcgtgttgctctgtctctgcgcttgga
agtcccaagaactgcgaagaagtgcacaaagtttttatggcatttggaccgagccagttc
cctttaggtcctacaacaggtaaagaccttcaggtctgcatctccaagaactcaacgtgt
tgcaccaaaaagatggaggagaagtaccaagtgctggcccgaagagacatccaggacctt
ctgcagacatccagctctgggctgaaacttctcatatctcgctacgtggccgcttttcaa
gaaacctttgaagtcctgatccggcaggcagagaatcacaccaacaccatcttccaggag
tcctaccccagcatggcggatcaggccgtgggcgcagtcagagagctcttcaccgacgtc
ggcctctttcttctgggctctgagctcagcgttgatgagctggtgcagcggttcttcgat
gccctcttcccactcgtctacaaacatctgataaactcgggccgcggcgatgtatcgccg
ggctacgctgagtgtgtgagatcattaagccgtgatgtcagaccatttggtgcagcgccg
ggcctgcttgccgatcagattacttcctctggggtctctgggaagcttctgcttcaggcg
ctgcatctcagcatcgaggtcatcaataccaccgaccacttacagctgagccgcgagtgc
aggcgggccctgctcaagatgcagttctgccctcattgccagggcttaacccagtccaag
ccttgcaggggttactgcctcaatgtgatgcgaggctgtttggcaagcatggcagaaatc
gacacccactggagggagtttgtcagctcgctggagggcctgtcagcgaggatgcacgga
acactggatttggagcaagtcctcctgggagttcacacgctgctgcacgatgctgtcgga
catgctttgcgaaacggagcttccatctcaaaacaggtccagaagtcgtgcggctcgccc
agcaggaggcctgcagagtcggtcagcgtgcatcacggcagcaggagggcatcgctcccg
cttcaagctccagtcaaagcgacaggagaagcatttaccagcaagagacgggacttctta
cgaactctgcggccttacagcacattctacggcggccttgcagatcagctgtgtgacaga
catctctcgtctggtgaaggccggctctgctggaatggaaccagcatggtacagagctac
acggttcgggtggtcggaagtggagtcagagctcaaagtactaatcctgaagtgaaggtg
aagggaatcgatcctgtgataaaccagatcatcgacaaactcagacacatcaaccagttg
ttacaggggaagtccatccctaagctgggctccttggatcagattgagacaggaagtgga
gacacagagggacgctacagcggcgagtgcgatgatgaggacggctgtgccggttcagga
ggcggcgagtcaagaaccaaagtttccaaagttcacaaaatggttccagatgtgatcagt
gattacaaacatcataatcatcatcctccatttgccagggatccagaaataggcagcaga
tctagcagcctcagactgattggagccatctgggtcccggtattgccttgtttacatatg
ctcctcatctggtaa
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