Oryzias melastigma (Indian medaka): 112162218
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Entry
112162218 CDS
T07439
Name
(RefSeq) polycomb group RING finger protein 5-A
KO
K11489
polycomb group RING finger protein 5
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
112162218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oml03036
]
112162218
Chromosome and associated proteins [BR:
oml03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
112162218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-Nse
zf-RING_10
zf-rbx1
zf-RING_6
TRAF3_RING
Actin_micro
zf-C3HC4_3
zf-C3HC4_5
DUF1272
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
112162218
NCBI-ProteinID:
XP_024153732
Ensembl:
ENSOMEG00000014083
LinkDB
All DBs
Position
LG15:18570239..18593152
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AA seq
248 aa
AA seq
DB search
MAATGRKHLVRDFNHFITCYLCRGYLIKPTTVTECLHTFCKSCIVQHFEESNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREKEEQQEVDFWKKNQPKENGQENPRRQRLGLP
DGGGGVDGGAGGGDDGDGGGDDDYHRSDPQIAICLDCLRNTGQSGESTVTDLMKRFIRCS
SRVTVGTIKKFLSLKLKLPSSYELDVLCNGEIMGRDHTLEFIYMTRWRLRGENTYPMVLE
YRPRIDFG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaacaggacggaaacacctggtgagggatttcaaccacttcatcacctgttac
ctttgtcgaggttacctgatcaaaccgacgacagtcaccgagtgcctgcacacattctgt
aaaagctgtattgtgcagcactttgaggagagcaatgactgtcctaaatgtggcattcag
gtccatgagaccaacccgttggagatgctcaggttggacaacactctggaggagatcatc
tttaagctagttcctggactcagagaaaaagaagaacagcaggaagtggatttctggaag
aagaaccagcccaaagaaaatggccaagagaaccccaggcggcagcggctcggtctgccc
gacggaggaggcggtgtggatggaggagcgggcggcggggacgacggggacggcggtgga
gatgatgactatcacagaagtgaccctcagatagccatttgtctggactgcctccgtaac
acggggcagtctggagaaagcacagtcacggatttgatgaagaggttcatccgctgctcc
agtcgagtcacagtggggactattaagaagtttctcagtcttaaactcaagctgccgagc
tcctatgagctggatgttctttgcaacggagaaattatgggccgagatcacactctggag
ttcatctacatgactcggtggcggctacgcggagaaaacacgtatcccatggttctcgag
taccgaccccgcatcgactttggctga
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integrated database retrieval system
