Oryzias melastigma (Indian medaka): 112162438
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Entry
112162438 CDS
T07439
Name
(RefSeq) class I histocompatibility antigen, F10 alpha chain isoform X1
KO
K06751
MHC class I antigen
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04145
Phagosome
oml04218
Cellular senescence
oml04514
Cell adhesion molecules
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112162438
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112162438
04145 Phagosome
112162438
09143 Cell growth and death
04218 Cellular senescence
112162438
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112162438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112162438
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112162438
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112162438
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Antigens
112162438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
Ig_2
AAA_21
Motif
Other DBs
NCBI-GeneID:
112162438
NCBI-ProteinID:
XP_036070101
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Position
LG11:complement(22280080..22297252)
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AA seq
388 aa
AA seq
DB search
MFFIVIHYVLVAINTASSEIHSLMHTCTAFSEPVNLTGIHKFSAIGLLDGRMIYYYDSTI
QKTIPKQKWIKEILEQEYWDKGTEYEKGEEKRFEILISQKKSSPKDIHVLQSLHGCFAEE
DENGTLQFKRSLDRNKYDGNDIQAAWSNPHVIVSYDKKECMDMMKTFLVYSTSELINASI
TKPPEVFMFATQAKEKTNIVLTCLATGFYPKNITMEIKRNGRVLTADDGLLSTGVRPNDD
DTLQRRDHVEILRTDSANYTCRITNKKFGIDAEKTWDRHLPLNDDAGGAIAVDVVVVGVV
LLVFVPVVIVWFKRNLCFSVGTSQKNPSVSSTPAITAGSENIPLINLPRAVSSPRGIPNQ
RTPNPSLRRSMSDPTRKTSKKKTFYSSI
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcatcgtgattcactatgtgttggtcgccataaacaccgcaagcagtgagata
cactctctgatgcacacctgcacggccttctctgaacctgtgaacctgacaggcatccat
aaattctctgctattggtctgctggacggcagaatgatctactactatgacagcactatt
caaaagacaattcccaaacagaagtggataaaggagatactcgaacaggaatactgggat
aaaggtacagagtacgagaagggagaagagaagcgattcgaaatcctgatcagccaaaag
aaatcaagtcccaaagacattcatgttcttcagtcgttacatggctgtttcgctgaagag
gatgaaaatggtaccctccagtttaagcgtagcttggacagaaacaagtatgacggaaat
gacatccaggctgcatggagcaacccccatgtgatagtgtcttatgacaagaaggagtgc
atggacatgatgaaaacattcctcgtttattcaacatcagagctcataaatgcctccatt
accaaaccacctgaagtgttcatgtttgcaacacaagctaaagaaaaaacaaacattgtg
ctgacctgcttagccacaggcttttatccaaagaatattactatggagatcaagagaaac
ggccgtgttctaacagcagatgatgggctgctttcaaccggggttcgcccaaatgacgat
gacactctacaaagacgagaccatgtggagattctgaggacagactctgcaaattacact
tgcagaatcaccaataaaaaattcggtatagatgctgagaagacctgggatcgacatctt
cctttaaatgatgacgcaggaggagctattgctgtcgacgttgttgttgttggagtcgtc
ttgcttgtgtttgtcccagtggtgattgtgtggttcaagagaaatctttgtttttctgta
ggaacttcacaaaaaaatccttctgtttcttcaactcctgccataactgcaggttcagaa
aatattcctttgatcaacctcccaagagcggtgtcatccccaaggggaattcccaaccaa
agaacaccaaacccctcattaagaagatcaatgtctgaccccacgaggaagaccagcaag
aagaagacattttattccagcatttag
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integrated database retrieval system
