Oryzias melastigma (Indian medaka): 112162570
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Entry
112162570 CDS
T07439
Name
(RefSeq) HLA class I histocompatibility antigen, B alpha chain
KO
K06751
MHC class I antigen
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml04144
Endocytosis
oml04145
Phagosome
oml04218
Cellular senescence
oml04514
Cell adhesion molecules
oml05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
112162570
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
112162570
04145 Phagosome
112162570
09143 Cell growth and death
04218 Cellular senescence
112162570
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
112162570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oml04147
]
112162570
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
112162570
Exosome [BR:
oml04147
]
Exosomal proteins
Proteins found in most exosomes
112162570
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
oml00537
]
Antigens
112162570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
DUF3943
Ig_2
Motif
Other DBs
NCBI-GeneID:
112162570
NCBI-ProteinID:
XP_036070260
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All DBs
Position
LG11:complement(22223982..22228542)
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AA seq
346 aa
AA seq
DB search
MFFVVNFFVFAIINTASNEKHSLRHIYTAFSKPVNFSGIHNFTAMGLLDDRMIYYYDSSM
DKKIPKQKWMKERLKPDYWDKGTEFLRREQMRFSDIFNQMRQNSSDTHVLQWMHGCVGEE
DKNGSVRFQDVEDGMDMYNFDGDEFLPNDTEKQEWAFAADAKLFPKMEAYQVKECMDWMD
TFLGYLRSHLRNATLAAPPKVFVFKTPAKEKANIVLTCLATGFYPKDITMEIKRDGRVLT
ADDGLVSTGIRPNDDDTFQRREHVEILRTDSSNYTCRVIHKGFSIDVEETWDRQPSPNDA
TGTPIGGVVVGVVVGVGVVLIAVCVAVWCRKNVSKEIILLFFFIFL
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgttcttcgtcgtgaatttttttgtttttgccatcataaacacagcaagcaatgagaaa
cactcgctgagacacatctacacggccttctccaaacctgtgaacttctcgggcatccat
aatttcactgctatgggtctactggacgacagaatgatctactactacgacagctctatg
gataagaaaattcccaaacagaagtggatgaaggagagactcaagccggattactgggat
aaaggtacagagttcctgaggagagagcagatgcggttcagtgatatcttcaaccaaatg
agacaaaattctagtgacactcatgttcttcagtggatgcatggctgtgtcggcgaagag
gataaaaatggcagcgtcaggtttcaggatgttgaggatggcatggacatgtacaatttt
gacggagatgaattcctgcctaacgatactgaaaaacaagaatgggcgtttgcagcagat
gcaaaactcttccccaagatggaggcttaccaagtgaaggagtgcatggactggatggac
acgtttctcggttatttaagatcacatctcagaaatgcaactcttgccgctccacctaaa
gtgtttgtgtttaaaactccagctaaagaaaaggcaaacattgtgctgacctgcttagcc
acaggcttctatccaaaagatattactatggagatcaagagagacggccgtgttctaaca
gcagatgatggtctggtgtcgactggcattcgcccaaatgacgatgacaccttccaaaga
cgagagcatgtggagattctgaggacagactcctcaaattacacttgcagagtcatccat
aaaggcttcagcattgatgttgaggagacctgggatcgccaaccttctccgaatgatgca
acaggaactcctattggtggcgttgttgttggcgttgttgttggtgttggagtcgtcttg
attgctgtgtgtgttgcagtgtggtgcagaaaaaacgtaagcaaagaaattattcttctg
tttttttttatttttttataa
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