Oncorhynchus mykiss (rainbow trout): 110485307
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Entry
110485307 CDS
T07259
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
omy02000
]
110485307
03037 Cilium and associated proteins [BR:
omy03037
]
110485307
Transporters [BR:
omy02000
]
Other transporters
Pores ion channels [TC:
1
]
110485307
Cilium and associated proteins [BR:
omy03037
]
Other cilia and associated proteins
Stereociliary proteins
110485307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
110485307
NCBI-ProteinID:
XP_036797717
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All DBs
Position
13:complement(62330233..62361587)
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AA seq
817 aa
AA seq
DB search
MAYSVDFNLRPIMELELESLRGDDTAQDSMTGAGLESGSPETLEMEVLTTEGRDRLASQM
SDVRERADERSEESIQTNLLARKSWSTATLRVLSSMPSRSIGQQSRLEIISQCNIRSTQL
RRYHRQTQDVSLSSRPSIRGYGIEADSEDVCEEETKRQELVNNLQSLSAGDRVRMLRATP
LSLAEKTKLRKLVFSDKVGQSLLSSQVPCCSLLKRALYHIWFGCLFILSSLQLWQVALKR
LGGRFGTGVLSYFLFIRTLLLFNVFLFLINGLFLVLPQAIHPPLHTPSSHRVTGLELFTG
TGYLSNSLMFYGYYTNSTINTSCRPDKATAGTGCGTTSDPHMMAYNIPLAYCFTIGITFF
ITGIVLVYSMSKSFERSFRVFKSQGNMAIKVFCSWDFKVSKKMSVRLQSENITTQLKELL
SEVKGGEEEKGRLSGMAVHLLAWSISLGSTFFCALGIHCFAKYMHLRRLEHAEGEVSVVH
EARLLALPGVVSCGNLLLPGLFNLVSWMENFNSPIVRLYVSIFRNLLLKVSILGVLCYHW
LGKIAAEPEQHGLQCWESFVGQELYRFLLVDFIFTVLYTVFGEFIWKRFSQGVLRRRRKP
VFDIARNVLELIYGQTLTWLGLLFTPLLPAVQILKLLLLFHMKKSSLLVNCQASRKPWRA
SQMSTLFISLLCFPSFLGATVSVTYTIWTIKPSSGCGPFRNLPFMFHSGKQWAQELKSTN
HKLAWLNWVHSCLVENPLFLFLLAGVFLMVIYIHTQVLDGQRKIISLLQEQIENEGKDKK
FLITSLQAIHEKRQYPLSPSSRPQPQGSEVEYVLVED
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atggcatacagtgtggacttcaatctgagacctataatggagcttgaattggagagtctt
aggggtgatgatacggcccaggactctatgacgggagcaggtctggagagtggcagtcct
gaaaccctggaaatggaggtccttacaacggaaggcagagataggctggccagccagatg
agtgatgtcagagagcgggcagatgagaggagtgaggaatccatacagaccaaccttctg
gcccggaagagctggtctaccgccaccctgagggtcctgtcctccatgcccagtcgcagc
atcgggcagcagagtcgtcttgaaatcatctcccagtgcaacatccgttctactcagctg
cgcaggtaccaccgccagacccaagacgtttccctctcctccagacctagtatccgtggc
tatgggatcgaggcagactctgaggatgtctgtgaggaagagaccaagagacaggagctg
gtcaacaatcttcagagtctgtcggccggtgaccgtgtgcgtatgctgcgtgccacgccc
cttagtctggctgagaagactaaactgaggaaacttgtattcagtgacaaagttggacag
tccctcttgagcagccaggttccctgctgtagcctccttaagcgagctttgtatcacatc
tggttcggatgtctcttcatcctcagttccctgcagttgtggcaggtggctttgaagagg
ctgggtggccgctttggcactggtgtgctctcctactttctcttcatcaggactcttctg
ctcttcaacgtctttctcttcctcatcaacggcctgttcctggtcctcccccaggccatc
cacccgccccttcacacccccagctcccacagagtcacaggcctggagctgttcaccggc
acgggttatctctcgaactctctaatgttttatggctactacaccaactccaccatcaac
accagttgtagacctgataaagccaccgccgggactggctgcggcaccaccagtgaccct
cacatgatggcctacaacattcccttagcctactgcttcaccatcggcataacattcttt
atcaccggcatcgtccttgtttacagcatgtccaagtcctttgagaggagtttccgtgtg
ttcaagtctcagggaaacatggccataaaggtcttctgctcctgggatttcaaagtcagc
aagaagatgtctgtcaggctgcagtcggagaacatcaccacccagctcaaggagctgttg
tcggaggtgaaaggcggagaggaggagaagggcaggctgtctgggatggcggtgcacctg
ctagcatggagcatttctctggggagcaccttcttctgtgcactcggcatccactgcttt
gccaagtacatgcacctgaggagacttgagcatgcagagggggaggtcagtgtggtgcat
gaggctcgtctgctggctctgcctggggttgtgtcctgtgggaacctcctcctccctggt
ctcttcaacctcgtgtcttggatggagaacttcaactcgcccattgtacgtctctatgtt
tccatcttcaggaacctactgctgaaggtgagcattcttggcgtactgtgctaccattgg
ctggggaaaattgcagctgaaccagagcaacatggtctgcagtgctgggagagctttgtt
ggtcaggagctgtatcgtttcctgctcgtggatttcatattcacggttctctacacagtc
ttcggagaatttatttggaagcggttttctcaaggagtgctgaggagaaggaggaagcca
gtgtttgatatcgcccgtaacgtactcgagctcatctatgggcaaaccctcacctggcta
ggcttgctcttcactcctttactgccagctgtgcagatcctcaagctgttgttgttgttc
catatgaaaaagagcagtctactggtgaactgccaggcatccaggaagccgtggagagcc
agtcagatgagcaccctcttcatctctctgctgtgtttcccctctttcctcggggccacc
gtgtctgtgacctacaccatatggacgattaagccctcctctggctgtggtcctttcagg
aacctccccttcatgttccactcgggcaaacagtgggcccaggagctgaagagtaccaac
cacaagctggcctggctcaactgggtacacagctgcttggtggagaaccccctcttcctg
ttcctgttggcaggtgtctttctaatggtcatttacattcacacccaagttttagacggc
caaaggaaaataattagtctgctacaggagcaaatagaaaatgaggggaaggacaagaag
ttcttaattactagtctgcaggccatccatgagaagaggcagtatccactgtccccttcc
tccaggcctcagccacagggcagtgaggttgaatatgttttagtggaagattaa
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