Oncorhynchus mykiss (rainbow trout): 110485715
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Entry
110485715 CDS
T07259
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110485715
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110485715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_8
Motif
Other DBs
NCBI-GeneID:
110485715
NCBI-ProteinID:
XP_036796251
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All DBs
Position
13:14137544..14175896
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AA seq
475 aa
AA seq
DB search
MLMSTDVTSIMLPVSRAIMDRDRELQDTMAGVHPNSTGASGAALRGMKRGDPASDAQTSA
ALVESVGAECKRPRIDASGVVAEVGQNNDPLTLGYHGYPTHSQGSQDAAGGQEGLVPPSF
SAFPPPPPPPPQNGLALEYGASLYAAGAIQGSVEAGQAGLNTPTSVPNSLTTHQSDVSSQ
IDTQLVSTGGVGGGSVGDDSEKGTPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFN
ERGSKGFGFVTFETSADAEKARAALHGTLVEGRKVEVNNATARVMTNKKMVTPYSNGGEG
LATLPYGLLNANSPTAGWKLSPMVGAMYSPELYTDFSGLSLSVPGFPYPAAAATAAATFR
GAHLRGRGRPVYGAVRAALPQQAIPTYPGVMYQEGFYGAADLYGGYAAYRYAQPTAVAGP
AGAAAAAAAAYSDGYGRVYTTDPYHAALNPAAAAAYGVGAMATLYRGGYSRFAPY
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgtaacatcaatcatgctgcctgtatctcgggctatcatggac
cgggatcgagagctccaggacacaatggccggggtgcatcccaactcgaccggggcttct
ggcgcagctctccggggaatgaagcgaggagacccagcatctgacgcgcagacgtcggca
gctcttgtggaatcggtcggggcagagtgcaagcgtccccggattgacgcatctggagta
gtcgcagaggtcggccagaacaatgaccccctgacccttggttaccatggatacccaacc
cacagtcagggctctcaggatgcagcaggtggtcaagagggtctcgtccccccatccttc
tccgccttcccccctcctccccctccacccccccagaacggcttggccctggagtacggg
gccagtctgtacgccgcaggggccatccaggggtcggtggaggccggacaggcaggcctt
aacaccccgacaagtgtcccaaacagcttaaccacccaccagtcagatgtgtcgtcacag
attgatacccagttggtgagtacaggaggtgttggcggagggtccgtaggggacgactca
gagaaggggacccccaaacgcctccacgtctccaacattcccttccgcttcagagaccct
gacctccggcagatgtttgggcaatttggaaagatcctcgacgtagagatcatattcaac
gagagaggatcgaaggggtttggctttgtgacgtttgagacgagcgctgatgctgagaag
gccagagctgctctccacggaactctggtggaaggacgcaaggttgaggtcaacaacgcc
acagccagggtgatgaccaataagaaaatggtcaccccatattctaatggaggagagggg
ctcgccactctaccttatgggctattaaatgccaactcccctacagccgggtggaagttg
agtccaatggttggagccatgtacagtccagagctctatacagatttctctggcctgtct
ctctcagtccctggtttcccgtaccctgcggcggctgccacagcggcggcgaccttcagg
ggcgcccacctccggggtcgtggccggccggtctacggtgctgtcagggcagccctaccc
cagcaagctatacctacatacccaggtgtgatgtatcaggaagggttttacggtgcagca
gacctctatggtggctatgctgcgtatcgctacgctcagccgactgcggtagctggtcct
gctggagcagcggctgccgcagctgctgcctacagtgatggctacggacgggtgtacacg
acagacccttaccacgctgcactaaaccctgccgcagctgcagcctacggtgtaggagct
atggccacactgtacaggggaggctacagtagatttgcgccctactaa
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