Oncorhynchus mykiss (rainbow trout): 110485903
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Entry
110485903 CDS
T07259
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 isoform X1
KO
K11651
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110485903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110485903
03036 Chromosome and associated proteins [BR:
omy03036
]
110485903
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110485903
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
110485903
PBAF complex
110485903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
GCN5L1
Pcf11_helical
RMI1_C
Motif
Other DBs
NCBI-GeneID:
110485903
NCBI-ProteinID:
XP_021412797
Ensembl:
ENSOMYG00000007092
LinkDB
All DBs
Position
13:complement(20825311..20835903)
Genome browser
AA seq
429 aa
AA seq
DB search
MSKRERERPYAPPPPPAPTTQLPNTPGFVGYNPYSHLAYNNYRLGGTTSNNSRATNSSGI
NIPKPPKPPDKPLMPYMRYSRKVWDQVKASNPDLKLWEIGKIIGGMWRDLTDEEKQDYLN
DYEAEKIEYNESMKAYHNSPAYLAYVNAKSRAEAALEEESRQRQSRLDKGEPYMSIQPAD
DPDDYDDGFSTKHSAAARFQRNHRLISEILSESVVPDVRSVVTTARMQVLKRQVQSLMVH
QRKLEAELLQIEDRHQDKKRKFIDATESFNGELKRLCCMKVEVDMEKISAEVAAAEDASR
RRLSEREKEASTSSSLEEEEKPVGPSNGSKSQQVSVRDSSNKERDETEPSPMDTGEKSKA
SEESTARPASEVEEGAPSEDKESVPEGVMEDGTSDSNTGSETTSAVTEDAPPSEPAASEG
PSRARPTAH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaagagaaagagaaaggccatatgcccctccccctcccccagcccctacaaca
caattgcccaacacccccggctttgtggggtacaacccctacagtcatctggcttacaac
aactacaggctgggagggacaacaagcaacaacagtcgggcaacgaattcttcaggaata
aacattccaaagccacccaagccgccagacaagccgttgatgccatacatgcgatatagt
cgcaaggtttgggatcaagtaaaagcctccaatcccgatctgaaactatgggaaattggg
aagataatcggtggcatgtggagggacctcactgatgaggagaaacaggattacttgaat
gattacgaagcagagaagattgagtacaatgagagcatgaaggcctaccacaactctccg
gcctacctggcttacgtcaacgctaagagccgcgccgaggccgctctggaggaggaaagc
cgacagcgccagtctcgtctcgacaagggcgagccgtacatgagtatccagccagcagac
gacccagatgattacgacgacggattctccacgaagcactcggctgccgcccgtttccag
cgcaaccaccggctgatcagcgagatcctgagcgagagcgtggtccccgacgtgcgctcc
gtcgtcactaccgcccgcatgcaggtcttgaaacggcaggtccagtctcttatggtgcac
cagaggaagctggaggcggagctacttcagattgaagaccgccaccaggacaagaaaagg
aaattcatcgatgccacagagtctttcaacggcgagctgaaaaggctgtgttgtatgaaa
gtagaggtggacatggagaagatatctgcagaggtcgctgcggcagaggatgcatcccgc
aggcgcctgtcagagcgggagaaggaggcgtccacgtcctctagcctggaggaggaggag
aaaccagttggcccgtcaaatggcagcaagagccaacaggtgtctgtcagggacagcagc
aacaaggagagagacgagacggaacccagccccatggatactggtgagaagtcaaaggca
tcggaggagtcgacggctcgtcctgccagtgaggttgaggagggggcgccgtccgaggac
aaggagagtgttccggaaggggttatggaggacggcaccagtgacagtaacacagggtcg
gagaccacctctgccgtgacggaggacgccccgcccagcgagccagcagcctcagagggg
ccgagcagggcacgccctaccgcccactga
DBGET
integrated database retrieval system
