Oncorhynchus mykiss (rainbow trout): 110487432
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Entry
110487432 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K12006
tripartite motif-containing protein 16
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110487432
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110487432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
DUF6468
Serine_rich
Motif
Other DBs
NCBI-GeneID:
110487432
NCBI-ProteinID:
XP_036797768
Ensembl:
ENSOMYG00000009198
LinkDB
All DBs
Position
13:63409911..63418900
Genome browser
AA seq
826 aa
AA seq
DB search
METLIIKNEENTEESHPTTGSKDVTTSMINMWDLNLNQEQEDPTTTHDKPGENTQPQNQE
QEDPTTTHDKPGENTQPQNQEQEDTTTTHDKPGENTQPQNQEQEDPTTTHDKPGQNTQSQ
NQEQEDPTTTHDKPGENTQPQNQEQEDPTKTHDKPGQNTQPQNQEQEDPTKTHDKPGENT
QPQNQEQEDPTTTHDKPGENTQPQNQEQEDPTTTHDKPGENTQPQYQEQEDPTATHDKPG
ENTQPQNQEQEDPSTTPDKPGQNTQPQNQEQEDPTTTHDKPGENTQPQNREQEDTTTTHD
KPGENTQPQTISSGFTVTPEDVLCDSCIEIPCRAQKSCLTCLVSYCEAHLRPHLENQRFQ
NHRLVEPLQDIECRTCEEHRLPLELYCLTDGCGVCVCCECEGQGHLGHSTVPVEEARRQI
QTELQKKQGEIMKTVSVAENSIGKLQSNTASIESSVAGVRAVMEQQFYLLQGAVEEARRR
ATEVLEGEQRQALSQAEGIQAHLEQKSQELKKTLARVERLFRNKRDVDFLQEYSEWKTGA
VDICLPGLYVGLTDRLASFSCLLTESTQELCDQLKATYRDKLKDICRTEKLGITTMVHPK
MSKSFSLPEPEMRDDFLTYASSLTFDPDTVHKFLRLTEDDRKVTNTTPWQHSYPDTPERF
EYWRQVMTSESLYLGRHYFEAELSGEGVHVGLTYKSIDRKGVERGSCITGNDFSWSLGRE
GRSFSTWHADMEAVVEATSVFTRIGVYIDFDSGSLAFYGVTDIAMTLLHRYKAEFMEPLY
PTVWLSKKDSVVLLVGPKDPPLMKSSTLPATPITPVATSAPVSPES
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctcatcatcaagaatgaagagaatacagaagagagtcatcccacaactgga
agcaaagatgtcaccacatccatgataaacatgtgggacctgaacctaaaccaggaacaa
gaggacccaacaacaacgcacgataagccaggggagaacacccagcctcagaaccaggaa
caagaggacccaacaacaacgcacgataaaccaggggagaacacccagcctcagaaccag
gaacaagaggacacaacaacaacgcacgataaaccaggggagaacacccagcctcagaac
caggaacaagaggacccaacaacaacgcacgataaaccagggcagaacacccagtctcag
aaccaggaacaagaggacccaacaacaacgcacgataaaccaggggagaacacccagcct
cagaaccaggaacaagaggatccaacaaaaacgcacgataaaccagggcagaacacccag
cctcagaaccaggaacaagaggatccaacaaaaacgcacgataaaccaggggagaacacc
cagcctcagaaccaggaacaagaggacccaacaacaacgcatgataaaccaggggagaac
acccagcctcagaaccaggaacaagaggacccaacaacaacgcatgataaaccaggggag
aacacccagcctcagtaccaggaacaagaggacccaacagcaacgcacgataaaccaggg
gagaacacccagcctcagaaccaggaacaagaggacccatcaacaacgcccgataaacca
gggcagaacacccagcctcagaaccaggaacaagaggacccaacaacaacgcacgataaa
ccaggggagaacacccagcctcagaaccgggaacaagaggacacaacaacaacgcacgat
aaaccaggggagaacacccagccccagacaatctctagcgggtttactgtcaccccagaa
gatgtgctgtgcgactcctgcattgagatcccgtgccgggcccagaagtcctgcctcacc
tgcctggtgtcgtactgcgaggcccacctcagaccccacctggagaaccagaggttccag
aatcaccggctggtggagcccttacaggacatcgagtgtcgcacctgtgaggagcaccgg
ctaccgcttgaactatactgcctgacggacggctgcggtgtgtgtgtgtgctgcgagtgt
gagggacaggggcatctggggcacagtactgtacctgtagaggaggctcgaagacagatc
cagacagagctgcagaagaaacaaggggagattatgaagaccgtctcagtggcagagaat
tccattggcaagctacagagcaacactgcatccatagagagctcggtggcaggggtacgt
gctgtgatggagcagcagttctatctgctgcaaggggccgtagaagaggcccggaggagg
gccacggaggttctggagggggagcagaggcaggcgctcagtcaggccgagggcatccag
gcccacctggagcagaagagccaagagctgaagaagaccctggccagagtggagagactc
ttcaggaacaagagggatgtagacttcctgcaggaatactccgagtggaagacgggggct
gtggatatctgtctgcctgggctctacgtcggcctcacagatcgcctggcctccttcagc
tgcctgctcactgagtccacccaggaactgtgtgaccagctcaaggctacctacagggac
aaactgaaggacatctgcaggactgagaaactgggcattacaaccatggtccatcccaag
atgtcaaagtctttttcactgcctgagcctgagatgcgagacgacttcctcacgtatgcc
agcagtctgacctttgacccagacactgtccacaagttcctgagactaactgaagacgac
aggaaggtgaccaacaccacgccctggcagcacagctacccagacacgcccgaacgcttc
gagtactggcgccaggtgatgacctcagagagcctctacctgggccgacactactttgag
gcagagttgagtggggagggcgtgcacgtgggactcacctacaagagcatcgaccggaaa
ggcgtggagagaggcagctgcatcacaggaaatgacttctcgtggagcctcggaagggag
gggcggagcttttccacttggcatgctgatatggaggcggtcgtggaagccacaagtgtg
ttcacgagaatcggcgtctacatcgactttgactcaggctcattagctttctatggtgtg
actgacatcgctatgacactcctccacaggtacaaggctgagttcatggagcccttgtat
cctactgtctggctctcaaagaaggacagtgtggtgttattggttggtcctaaggacccc
ccactaatgaagagctcaactctgcctgccacccccatcactcccgtggcaacatcagct
cctgtcagtccagaatcataa
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