Oncorhynchus mykiss (rainbow trout): 110488327
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Entry
110488327 CDS
T07259
Name
(RefSeq) H-2 class I histocompatibility antigen, Q10 alpha chain isoform X2
KO
K06751
MHC class I antigen
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04145
Phagosome
omy04218
Cellular senescence
omy04514
Cell adhesion molecules
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
110488327
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110488327
04145 Phagosome
110488327
09143 Cell growth and death
04218 Cellular senescence
110488327
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110488327
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110488327
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110488327
Exosome [BR:
omy04147
]
Exosomal proteins
Proteins found in most exosomes
110488327
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Antigens
110488327
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MHC_I
C1-set
Ig_3
ig
Motif
Other DBs
NCBI-GeneID:
110488327
NCBI-ProteinID:
XP_021416205
LinkDB
All DBs
Position
32:complement(32891743..32907337)
Genome browser
AA seq
392 aa
AA seq
DB search
MYTFILFVFYFSTECIVQSQSVIYIYTALSKPVELPGIHEFTAMGLMNNRQIDYYDSVDK
KKIPKQDWMRDKLPADYWEKGTQSRKSKEQWFKVNVDILMNRMRHNNTDVHILQWRHGCE
IDKQPDGTLKFIKGTDQYSYDGDDFLAFDDANMQWVAPVDQALPTKRKWDGVQILNQYTK
GYLEKECVDWLSKFMTYGDKEFSKADSPPNIYVFANKAKTAGNVRLTCMATGFYPKDVNI
NFKKNGIQLNKNDGVLSTGARPNNDDTYQIRMSVQIPEADKQTYECFVNHITLNESIMEK
WDGTCRDCSQSTDAIIAIIIGGAAAIGIIIVLFRWKKGKICAGNTGALPPTGIQAPLNGK
DSGSINSSDSGKGSQKERSSDGASEEAPMLPI
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgtttatattatttgttttttatttctcgacggaatgtattgttcagagccaa
agcgtgatctacatctacactgccctctcaaagccagttgaattgcctggtatccatgag
ttcactgccatgggcctgatgaataatagacagatcgattactatgacagtgtggataaa
aagaagattcccaaacaggactggatgagggacaagctgccagcagactactgggaaaaa
ggcactcagtcacgcaagagcaaggagcagtggttcaaagtaaacgtcgacatcctgatg
aaccgcatgaggcacaacaacactgatgtccatatccttcagtggaggcatggctgtgag
attgacaaacagccagacggcacattgaaattcataaagggcactgaccaatacagctac
gatggtgacgacttcctggcctttgacgatgccaatatgcagtgggtggccccagttgat
caagctctgccgactaagaggaagtgggacggggtgcagatcctcaaccagtacaccaag
ggctacctggagaaggagtgtgtggactggctgtccaaattcatgacatatggggacaaa
gaattcagtaaagctgactcccctccaaatatctatgtttttgctaataaggccaaaact
gcaggaaatgtccgcctgacctgcatggcgacaggtttctatcccaaagatgtgaatatt
aattttaagaagaacggtatccaactgaacaaaaacgatggagtgctgtctacaggagcc
cgacccaataatgatgacacctaccagatcaggatgagtgtgcagatcccagaggcagac
aagcaaacttatgaatgctttgtcaaccatataacgttgaacgagtcaattatggaaaaa
tgggatggaacatgccgtgattgtagccaatccacagatgctatcattgctatcatcatt
ggtggcgctgctgccattggcataattatcgtgctgtttcgttggaagaagggcaaaata
tgtgctggtaatacaggagctctaccacctactgggatccaggcccctctaaatggcaaa
gacagtggaagcatcaactcatcagactctggtaaaggcagccagaaggaaaggtcttca
gatggagccagtgaggaggcaccgatgctgcctatttga
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