Oncorhynchus mykiss (rainbow trout): 110489190
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Entry
110489190 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
omy04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110489190
04120 Ubiquitin mediated proteolysis
110489190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110489190
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110489190
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
110489190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
FANCL_C
Prok-RING_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
110489190
NCBI-ProteinID:
XP_036799333
Ensembl:
ENSOMYG00000035837
LinkDB
All DBs
Position
14:35854162..35867009
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AA seq
674 aa
AA seq
DB search
MNTTNTKKNPNIQTSALKQTGREYLHIKIHFQFVKYFCAVDTAYTMVRAGLVTATSLALT
GAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKFMRKIFFGQLRAAEME
HLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFIKCFHWLAEDRVDFMERSPNISW
VFHFRVFSLMVLLGILDFLFVNHACHSIITRGASVQLVFGFEYAILMTMVLTTFIKYTLH
TVHLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTFPLFAIRPMYLAMRQF
KKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVTGAKKLPCNHIFHSSC
LRSWFQRQQTCPTCRMDVLRASNPNQPPTPAPAQPPAPAAPANAPVPVPGNVGPGMMPHF
PPGLFPFWGPFPGAAPPAGAPGAPGATDAPGATEAAQTQGAGTSHSTGASTVGAAPAPGG
PMPGFPFPSFPPPPFPSAPWLTMPPPPPFVSSMPPPPPALSTMSETELRELEQEGRRGLE
ARLQCLHNIHTLLDAAMLNIHHYLTTVATLTPPQSETNSAAGEASGSSPPSTSAETQENQ
ENDSQSSTAAEPEAVNGAAGFSQPDSTTLGDSEDKRDEEEGDGEEVGEDGEPNPSELRRR
RLRKLETTPPPPDH
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgaacacaacaaatacaaaaaaaaacccaaatatacaaacgagtgcattaaaacagaca
gggagggagtatttacatatcaagattcattttcaatttgttaaatacttttgtgctgta
gatactgcctacaccatggtgcgtgcaggcctggtgactgccaccagtctggctctgact
ggcgctgtgattgcccatgcctactttctcaaacaccagttctaccccactgtggtctac
ctcactaagagtagccccagtatggcagtgttgtacatccaggcgtttgtgttggtgttc
ctattgggaaagttcatgcgtaaaatcttcttcggacagctgagagctgcagagatggag
catctgatagagcgatcctggtatgctgtcacagagacgtgtctggcctttaccgtgttc
agggatgacttctctccccgcttcgtagccctcttcaccctgctgctcttcatcaagtgc
ttccactggctggctgaggacagggttgactttatggagagaagtcctaatatatcctgg
gtcttccacttcagggtgttctctctcatggtgttgctgggaatcctggacttcctgttt
gttaaccatgcctgtcacagtatcatcacccgaggggcctctgtccaactagtctttgga
tttgagtatgccatcctgatgacaatggtgctcaccaccttcatcaagtacaccctccac
actgttcaccttcagagtgacaacccctgggacaacaaagcagtctacatgctctacacc
gagctcttcactggtttcatcaaggtcctcctgtacatggcgttcatgaccatcatgata
aaggtgcacaccttccccctattcgccatccggcccatgtacctggctatgaggcagttc
aagaaagcagtaacggatgccataatgtcacggcgagccatccgcaacatgaatacactt
tacccagatgccactcctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgt
gaagagatggtgactggagccaagaaacttccctgcaaccatatcttccactctagttgc
cttcgttcctggttccagagacagcagacgtgtcctacatgtcgtatggatgtcctccgg
gcctctaaccccaaccagcctcccaccccagcgcctgcccagcctcctgccccggcagca
cccgccaacgcccctgtccctgtccctgggaacgttggccctggaatgatgccccacttc
cccccaggactgtttcctttctggggccccttccctggagcggctccccctgctggtgct
cccggtgccccaggggccacagacgcccctggggccacagaggcagctcagactcagggc
gctggtaccagtcattccacaggggccagtacagtcggtgctgctcctgctccaggaggc
cctatgcctgggttccccttcccctccttcccacccccaccgttcccctcagctccatgg
ctgactatgccaccacctccaccgtttgtgtcatccatgccccctcctcccccggccctg
tccaccatgtcagagactgagctgagggagctggagcaggagggccgtagaggcctggag
gccagactgcagtgtctccacaacatccacactctactggacgctgccatgctcaacatc
caccactacctcactaccgtcgccacgctcactcctcctcagtcagaaaccaacagcgct
gccggcgaggccagcggatcatctcctccctccactagtgcagaaacccaggagaaccag
gagaatgactctcagagcagtacagccgctgaacctgaagctgtgaatggggccgcaggt
ttctcccagccagactctaccacgttgggcgacagtgaagacaagcgggatgaagaggaa
ggagatggagaggaagtcggcgaagacggagagcccaacccttcagagctgaggcgccgt
cgtctccgcaaactcgagaccacaccccctcctcctgaccactga
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