Oncorhynchus mykiss (rainbow trout): 110490793
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Entry
110490793 CDS
T07259
Symbol
smo
Name
(RefSeq) smoothened homolog
KO
K06226
smoothened
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110490793 (smo)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
omy04030
]
110490793 (smo)
G protein-coupled receptors [BR:
omy04030
]
Frizzled / Smoothened family
110490793 (smo)
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GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
Motif
Other DBs
NCBI-GeneID:
110490793
NCBI-ProteinID:
XP_036800997
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Position
15:complement(69164155..69184500)
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AA seq
830 aa
AA seq
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MSSRGWSSIVGGLGMLCVWAASFLVTHAVTVQRNETIFNDFCKKTTTCEVLKYNTCLGSP
LPYTHTSLALAEDSSTQDEAFEKLAMWSGLRNAPRCWAVIQPLLCAVYMPKCDNGQVELP
SQHLCQATRRPCSIVDQERGWPNFLKCEEMDKYPMGCTNEVQKLKFNTSGHCEAPLVKTD
VQASWYKDVEGCGIQCNNPLFTDEEHSDMHAYIAVFGTVTLLCTFFTLATFLADWKNSNR
YPAVILFYINTCFFMGSIGWLAQFMDGARKEIVCKSDNTMRLGEPSSTETLSCVIIFSLV
YYSLMSGVIWFVMLTFAWHTSFKALGTTHQPLSGKTSYFHMVTWSVPFILTVAILATAEV
DGDSVSGICFVGYKNYRYRAGFVLAPIGVVLVIGGYFLIRGVMTLFSIKSNHPGLLSEKA
ASKINETMLRLGIFGFLAFGFVLITFGCHFYDFFNQAEWEKSFREYVLCEANVTIAHQTN
KPIPECTIKNRPSLLVEKINLFSMFGTGIAMSTWVWTKATILIWKRTWCKVIGRSDDEPK
RIKKSKMIAKAFSKRKELHKDPEKELSFSMHTVSHDGPVAGINFDLNGEPSNEMSSAWAQ
HVTKMVARRGAILPQDISVTPTGTPVPPPEERNKLWMVEAEISPEMMKRKKKRKKRKKEA
RPLEELAEHQGYRQREFGTSSVPRLPKLPGHRSLVANLRQHQEAEDVLPGSYPEFRPSHP
LPYQERYGGALGASSSQRSRYPDLNPLSLSDLPEDLGLGPRCRPQQPPLSFWQPNGAFHY
SGEVAPMAGLSGRTDHMGRSQGGQRRAEWGQIHSRTNLMEAELMDADSDF
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccgtggatggagttccattgttggtgggttggggatgctttgcgtttgggct
gcctcctttctggttactcatgcggtaacggtacagagaaacgaaacaattttcaatgat
ttctgcaagaaaactacaacatgtgaagtgcttaaatataatacatgtcttgggtcccca
ctaccgtacacgcacacgtctcttgccttggctgaagactcaagtacccaagacgaagca
tttgagaagttggccatgtggtctggtctgaggaacgcccctcgctgctgggcggtcatc
cagcccctgctgtgtgccgtctacatgcccaagtgtgacaacgggcaggtggagcttccc
agccagcacctgtgccaggctacgcgtcgcccctgcagcatcgtggaccaggagaggggc
tggcccaacttcctcaagtgtgaggagatggacaagtaccccatgggctgcacgaacgag
gtgcagaagctgaagttcaacacttcgggacactgcgaagcccccctggtgaagacagac
gttcaggccagctggtacaaagatgtggagggctgcggcatccagtgcaacaaccccctg
ttcaccgacgaggagcactcggacatgcacgcctacatcgctgtgttcggcaccgtcacc
ctgctctgcacctttttcactctggccacctttctggcggactggaagaattcaaaccgt
taccccgccgtcatcctcttctacatcaatacctgtttcttcatgggcagtatcggctgg
ctggctcagttcatggatggagctcgcaaagagatcgtgtgtaagagtgacaacaccatg
cgtttaggggagccctcgtctaccgagactctgtcgtgtgtcatcatcttcagcctcgtc
tactactccctgatgtctggggtgatctggtttgtcatgctgaccttcgcctggcacacg
tccttcaaggccctgggcaccacccaccagcccctgtcgggcaagacctcatacttccac
atggtcacatggtccgtccccttcatcctcactgtggctattctagccaccgctgaggtg
gacggagactctgtcagtgggatctgtttcgtgggctataagaactaccgctaccgtgct
ggctttgtgttggctcccattggagttgtgcttgtcattggtggctatttcctcatacga
ggagtcatgacgttgttctccatcaagagtaaccacccgggtcttctgagtgagaaggca
gcgagcaaaatcaacgaaacaatgctaagacttggtatatttgggttcctggcgtttggc
tttgtcttaatcacatttggctgccacttctatgacttcttcaaccaggctgagtgggag
aagagcttcagagaatatgtgttgtgcgaggccaatgtgacgatcgctcatcagaccaac
aagccgatcccagaatgtactatcaagaaccgtcccagtctactggtggaaaagattaat
ctgttctctatgttcggcacgggcatcgccatgagcacctgggtgtggaccaaggccacg
atcctcatctggaaacgcacctggtgcaaggttatcggccgtagcgacgatgagcccaag
aggataaagaagagcaagatgatagccaaggccttctccaagcgcaaggagctccacaaa
gacccggagaaggagctgtccttcagcatgcacactgtctctcatgacgggccagtagct
ggcatcaactttgacctgaacggggagccatccaacgagatgtcttcagcctgggcccag
catgtgaccaagatggtggccaggaggggcgccattctaccgcaggacatctctgtcacc
cctacagggacacctgttccaccgccagaggagaggaacaagctgtggatggtggaggcg
gagatctcccctgagatgatgaagaggaagaagaagaggaagaagaggaagaaggaggcg
cgtcctctggaggagctggccgaacaccagggctaccgtcagcgagagtttggcaccagc
tcggtgccacggctacccaagctgcccggccacaggagcctggtggccaatctgaggcag
caccaggaggctgaggacgtccttccaggctcttacccagagtttaggccctctcatccc
ctgccctaccaggagaggtacggaggagccctgggggcctcctctagccagaggagcagg
taccctgacctcaaccccctctccctcagcgacctgccagaggacctcggcctggggcct
cgctgccgcccccaacaaccacccctctccttctggcagcccaatggagcgttccactac
tccggggaggtggcgcctatggcagggctgtctgggaggacagaccacatggggaggtcg
caggggggtcaaaggagggcggagtgggggcagatccactctagaaccaacctgatggag
gcggagcttatggatgctgactctgacttctga
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