Oncorhynchus mykiss (rainbow trout): 110491258
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Entry
110491258 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K28076
finTRIM family protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110491258
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110491258
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRIM_CC
PRY
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
U-box
zf-C3HC4_3
RING_XB3-XBAT31
ANCHR-like_BBOX
YscO-like
zf-RING_5
zf-RING_6
Fib_alpha
Wtap
zf-RING_2
Y1_Tnp
DUF8604
GST_C_7
LMBR1
DUF8567
Motif
Other DBs
NCBI-GeneID:
110491258
NCBI-ProteinID:
XP_036828064
LinkDB
All DBs
Position
Unknown
AA seq
553 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLDLLKEPVTTACGHTYCRFCIEGCWDQDVLKGIYSCPQCRET
FTPRPNLRKNNMLTEIVEKLRKTGLQAAPPPALCYAGPGDVVCDVCTGTRKQKALMSCLV
CLASYCETHLQPHYESPAFKKHKLVKATAQLQENICSHHDKLLEVYCRTDQQCICLLCVM
DEHKGHDTVSAEAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESFKRSAQSAVED
SDQIFTELIRSIERRSSEVKELIRAQEKAQVSQAEGLLEQLKQEIAELRKRSTELEQLSH
TEDHIHFLQRYQSLSSISVSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKIS
TTVNIVDVVLPPEPKTREQLLQYSCQLTLDPNTAHTDLSLSEGNRKVTRTDQVQPYPDHP
DRFTYWYQLQVLCREGLSGRCYWEVERTGYVVTAVSYKDISRTGNDGGFGYNNKSWSLEC
SRGGYCFRHNNVVTKVSGPQSSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYP
GFWLYGYAELVKL
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctggat
ctactgaaggagccggtcactactgcatgtggacacacttactgtagattctgtattgag
ggctgctgggatcaggatgttctgaaagggatctatagctgtcctcagtgcagagagacc
ttcactccaaggcctaatctgaggaaaaataacatgttgactgagattgtggagaaactg
aggaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggtgtgtgatgtctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatctcctgctttcaag
aagcacaagctggtcaaagccacggcacaactacaggagaatatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgtctgctgtgtgtgatg
gatgaacataaaggccatgatacagtgtcagctgaggcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctttcaagcgctctgcacagtcagcagtggaggac
agtgatcagatctttactgagctgatccgctccattgagagaaggagctctgaggtgaag
gagctgatcagagcccaagagaaggctcaagtgagtcaagctgaaggactcctggagcaa
ctgaagcaggagatagctgagctgaggaagagaagcactgagctggagcagctctcacac
acagaggatcacatccatttcctccagaggtatcagtctctctccagtatcagtgtatct
tcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagtaagact
gtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaagatctcc
actacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaacagttg
ttacaatattcctgtcagctcacactggacccaaacacagcacacacagacctctctctg
tctgaagggaacagaaaggtgacacgtacagaccaagtccaaccatatcctgaccatcca
gacagattcacctactggtaccagttacaggttctgtgtagagagggtctgtctggacgc
tgttactgggaggtggagaggactggttatgttgttacagcagtctcatataaagacatc
agcagaacaggtaatgatggtggatttggatacaataacaagtcctggagtttagagtgc
tctagaggtggttattgtttcagacacaataatgttgtgactaaagtatcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcct
gggttttggctctatggttatgctgagctggttaaactgtag
DBGET
integrated database retrieval system
