Oncorhynchus mykiss (rainbow trout): 110491260
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Entry
110491260 CDS
T07259
Name
(RefSeq) tripartite motif-containing protein 16 isoform X1
KO
K28076
finTRIM family protein
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110491260
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110491260
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
TRIM_CC
zf-C3HC4
zf-C3HC4_2
U-box
RING_XB3-XBAT31
zf-C3HC4_3
zf-RING_10
zf-RING_5
zf-RING_2
DUF8604
ANCHR-like_BBOX
zf-RING_6
MAP65_ASE1
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
110491260
NCBI-ProteinID:
XP_036828072
LinkDB
All DBs
Position
Unknown
AA seq
479 aa
AA seq
DB search
MAQQGVLLDQDQFCCSVCLNLLKEPVTTACGHSYCRSCIEGCWDQDDLKGVYSCPQCRHT
FPTRPMLMKNNMLAEVVEKLKKTGLQAAPPPALCYAGPGDVACDFCTGTRKQKALMSCLV
CLASYCETHLQPHYEFPALKKHKLVKATAQLQEKICSHHDKLLEVYCRTDQQCICYLCTM
DDHKGHDTVSAAAERTEKQRQLGMSQQKVQQRFQEREKELKELQQAVESLKSYQSLSSIS
VSSDLPSIVVRPLQYFGDVSKTVSELREKLEDFLKGEWTKISTTVNIVDVVLPPEPKTRE
QLLQYSCQLTMDPNTAGTLLSLSEGNRKVTNTGQVQPYPDHPDRFTNWYQVLCREGLSGR
CYWEVEWSGDVVYTAVSYKDISRTGTDGGFGNNKSWSLKCSRGGYCFRHNNVVTKVSGPQ
SSRVGVYLDHKAGTLSFYSVSDTMTLLHRVQTTFTQPLYPGFCFNSIFYGTAIAELVKL
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggctcaacagggagttctgctggaccaggaccagttctgttgttctgtctgtctgaat
ctactgaaggagccggtcactactgcctgtggacacagttattgtaggagctgtattgag
ggctgctgggatcaggatgatctgaaaggggtctatagctgtcctcagtgcagacatacc
ttccctacaaggcctatgctgatgaaaaataacatgttggctgaggtggttgagaaactg
aagaagacaggactccaggctgctccccctcctgctctgtgctatgctggacctggagat
gtggcgtgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtg
tgtctggcctcttactgtgagactcacctccaacctcactatgaatttcctgcattgaag
aagcacaagctggtcaaagccacggcacaactacaggagaagatctgctctcatcatgac
aaactgctggaggtttactgtcgtaccgatcagcagtgtatctgttatctgtgtacaatg
gatgaccataaaggccatgatacagtgtcagctgcagcagagaggactgagaaacagagg
cagctggggatgagtcagcagaaggtccagcagagattccaggagagagagaaggagctg
aaggagctccaacaggctgtggagtctctcaagagttatcagtctctctccagtatcagt
gtatcttcagacttacccagcatcgttgtccgtcctcttcagtactttggagatgtgagt
aagactgtgtctgaactgagagagaaactagaagacttccttaaaggagaatggaccaag
atctccactacagtgaatatagtggatgttgtactgcctccagagcccaagaccagagaa
cagttgttacaatattcctgtcagctcacaatggacccaaacacagcaggcacactcctc
tctctgtctgaagggaacagaaaggtgaccaatacaggccaagtccaaccatatcctgac
catccagacagattcaccaactggtaccaggttctgtgtagagagggtctgtctggacgc
tgttactgggaggtggagtggagtggtgatgttgtttatacagcagtctcatataaagac
atcagcagaacagggacagatggtggatttggaaacaacaagtcctggagtttaaagtgc
tctagaggtggttattgtttcagacacaataatgttgtgactaaagtatcaggccctcag
tcctccagagtaggagtgtacctggatcacaaggcaggtactctgtccttctacagtgtc
tctgacacaatgaccctcctccacagagtccagaccacattcactcagcccctctatcct
gggttttgtttcaattctattttctatggtactgctatagctgagctggttaaactgtag
DBGET
integrated database retrieval system
