KEGG   Oncorhynchus mykiss (rainbow trout): 110492535
Entry
110492535         CDS       T07259                                 
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1 isoform X1
  KO
K22544  deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03250  Viral life cycle - HIV-1
omy04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110492535
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    110492535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:omy03400]
    110492535
DNA repair and recombination proteins [BR:omy03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     110492535
SSDB
Motif
Pfam: HD SAM_2 SAM_1 PDEase_I HD_assoc_2
Other DBs
NCBI-GeneID: 110492535
NCBI-ProteinID: XP_021422612
Ensembl: ENSOMYG00000038194
LinkDB
Position
16:complement(64316220..64342275)
AA seq 624 aa
MDVRKRPREDLPNTSCSDQFKPPEKRDSEAALQDFGQWGVEDVCRYLRQEGHLKWEDAFR
EQKMTGVGLRYLTETLLDKMGIVPLGTRLQILHSLRKLWQMAAVTTKVFNDPIHGHVEMH
PLLVRIMDTPQFQRLRHIKQLGGAYFVFPGASHNRFEHSIGVGYLAGRLVQELNERQPEL
LISSRDILCVQIAGLCHDLGHGPFSHMFDSMFIPKMHPKSKWKHENASLAMFDHLVSVNA
LEPVMKDHGLVLPDDLVFIKEQIAGPQNTVPLRQGWPYKGRPEDKSFLYEIVANKMSGID
VDKWDYFARDCYHLGIPNNFDYHRFLKFARVCEVDGKKQICTREKEVGNLYDMFHTRNYL
HRKAYQHKVGHIIETMITEAFIKAEPHIQIQGSEGKMFTISTAINDMEAYTKLTDHVFEQ
ILYSSSSELAEARKILHNITCRNLYKNMGQTQAKKRVEVSQEQLQKWASELATCRPESDL
QGVTLEPGDFVVNIINMDWGMKEKNPINNMRFYCKNTPTKTTQISRNQVSQMLPDQFAEQ
LIRVYFKKRDEKTVEAAKINYVKWCMDNNFSKPQDGDSIAPELTPLKRNWAHNDDENDDE
LDSQGGRSRAAVNIGQQKAKARLF
NT seq 1875 nt   +upstreamnt  +downstreamnt
atggatgttcgaaagcgtcccagagaagatttgccgaatactagttgtagtgatcagttc
aaacccccggagaagcgggattctgaggcggcgttgcaggatttcgggcagtggggtgtc
gaggacgtttgtagatacctgcgtcaagaaggtcacttgaaatgggaggatgcattcaga
gagcaaaagatgacaggagtgggattacgatacctcacagagacacttctggataaaatg
ggtatagtgcctctaggcacccggttgcagatcctgcacagtctgaggaagctgtggcag
atggcagcagtgaccaccaaggtgtttaatgaccccatccatggccatgtagagatgcat
cctctgctggtccgtatcatggacacccctcagttccagaggctccgccacatcaagcag
ctgggaggagcatatttcgtcttccctggggcctcccacaaccgcttcgaacactccata
ggggtgggctacctagcaggtcggctggtccaggagttgaatgagagacaaccggagctc
ctcatctccagtagagacatcctgtgtgtccagattgctgggctctgtcacgacctgggt
catggtcctttctcccatatgtttgatagcatgttcatccccaaaatgcatccaaagtcc
aagtggaagcatgagaatgcgtcacttgcgatgtttgaccatctggtgtctgtgaatgcc
ttggagccagtgatgaaggatcatggcctggtcctacctgatgacctggtcttcatcaag
gaacagattgctggaccacagaacactgtccctctcagacaggggtggccttataagggc
cgtccagaggataagtctttcctctatgagattgtggccaacaaaatgagcggcatcgat
gtggacaagtgggactacttcgccagggactgctaccacctgggcatcccgaataacttt
gactaccatcgcttcctcaagtttgctcgtgtgtgtgaggtagatgggaagaagcagatc
tgcaccagagaaaaggaagtgggtaatctgtacgacatgttccacacacgcaactacctc
cacagaaaagcctaccagcacaaagtgggacacataatagagacaatgatcacagaggcc
ttcatcaaggcagaaccccacatccagattcaaggttcagagggaaaaatgttcaccatc
tccacagcaataaatgacatggaggcctacactaaactcactgaccatgtgtttgagcag
atcctgtactcgtcatcctctgagctggcagaggccagaaagatcctccacaacatcacc
tgcagaaacctctacaagaatatgggacagacccaagccaagaaacgtgtggaggtctca
caggaacagctccagaaatgggcaagtgaattggcgacgtgcaggcctgagagcgacctc
cagggcgtcactctagagccaggggactttgtagtcaatatcatcaacatggactggggt
atgaaggagaagaaccccatcaacaacatgcgtttctactgtaagaataccccaaccaaa
accacccagatcagcaggaaccaggtgtctcagatgctgccagatcagtttgctgagcag
ctgatcagggtctactttaagaagagagatgagaagaccgtggaggcagctaagattaac
tatgtcaagtggtgcatggacaacaacttctccaagcctcaggacggagattcgattgca
ccggagctcacccctctgaagcgaaactgggcccacaatgatgatgagaacgatgatgaa
ttggatagccagggaggaagaagcagggctgcagtcaacattggacaacagaaggcaaaa
gccagactcttttag

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