Oncorhynchus mykiss (rainbow trout): 110493441
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Entry
110493441 CDS
T07259
Name
(RefSeq) transcription factor SOX-10
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110493441
Transcription factors [BR:
omy03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110493441
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110493441
NCBI-ProteinID:
XP_021423384
Ensembl:
ENSOMYG00000007176
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All DBs
Position
17:complement(21411626..21417430)
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AA seq
496 aa
AA seq
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MSGEEHSLSEAELSPGGSDDGHSLSPAHSGATGGRDSPLIGPSQQLTGLSGADGGGEDGG
LVPKSEVDMDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKSKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQPR
RRKNGKLGTNGEGGEGAEGDGSHAQSHYKALHLDVHSTGAGSPLADLHHHHHHHPAGQGH
SPPTPPTTPKTELQSGKMTEGKREGGGGSGSSRGGGLGVGAEGASGGHSSAGGKPHIDFC
TMDIGEISHDVMANIEPFDVNEFDQYLPPNGHPGVGQGGAATSSSSATSYAYALAAASGH
SAAWLSKQHQHQQPSPSASDATKAQIKSESGAGSHYAESSSSSSGTHVTYTPLSLPHYGS
AFPSLPSRAQFEYGEHQAPGPYYAHSSQAPGLYSAFSYMGPSQRPLYTTITDPSSVAQSH
SPTHWEQPVYTTLSRP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaggagcacagtctatccgaggcagagttgagtcccgggggctcagatgat
ggtcactctctgtcaccggcacactccggggccaccggcggccgggactccccgctcatc
ggtccgtcgcagcaactgacggggctttctggcgcagatggcggcggagaggacggtgga
ctagtacccaagtcagaggtggatatggaccggttccccatcggcatccgcgaggcggtc
agccaggtgctggacggatacgactggacgctcgtgcccatgcccgtgcgcgtaaacaac
gggaacaagagcaagccgcacgtgaagaggccgatgaacgccttcatggtgtgggcgcag
gccgcgcgccgtaaactggcggaccagtaccctcacctgcacaacgcggagctcagcaag
acactcggcaaactgtggaggctcctgaatgagagtgacaagaggcctttcattgaggag
gcggagcgactgcggaaacaacataagaaggactacccagagtacaagtaccagccccgc
agacgcaagaacggcaagctggggaccaatggtgagggaggggagggagcagagggggat
ggcagccacgcccagtcccattacaaggccctccacctggatgtgcacagtacaggggct
gggtcccccctggccgacctccaccaccatcatcaccaccaccctgcaggtcagggtcac
agcccgccaacaccccccaccaccccaaagacagagctccagtctggaaagatgacggag
gggaagagggagggcggaggtggctcaggatcctcccgtggaggaggcctgggggttgga
gcagagggggcctccgggggccattcatcagcgggcgggaaaccccacatcgacttctgc
accatggacatcggcgagatcagccacgacgtgatggccaacatcgagcccttcgacgtc
aacgagtttgaccagtacttgccgcccaacgggcacccaggggttggccagggcggcgcc
gccacatcaagctcctccgctacatcctacgcctacgccctcgctgctgccagcggccac
tcagccgcctggctctccaagcagcatcagcatcaacagccctccccctcagcctcagac
gccaccaaggcccagatcaagagtgagtccggggccgggagccactacgcagagtcttcc
tcctcttcgtcaggaacccacgtcacctacacccccctcagcctcccccactacggatca
gccttcccctcgctgccctccagggcccagtttgagtacggggagcaccaggctccgggg
ccgtactacgcccactccagccaggccccggggctgtactcagccttctcctacatgggg
cccagccagaggcccctttacactaccatcactgacccctccagcgtggcccagtctcac
agtcctacacattgggagcagccagtctacaccaccctgtcacggccatga
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