KEGG   Oncorhynchus mykiss (rainbow trout): 110493441
Entry
110493441         CDS       T07259                                 
Name
(RefSeq) transcription factor SOX-10
  KO
K09270  transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:omy03000]
    110493441
Transcription factors [BR:omy03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    110493441
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2
Other DBs
NCBI-GeneID: 110493441
NCBI-ProteinID: XP_021423384
Ensembl: ENSOMYG00000007176
LinkDB
Position
17:complement(21411626..21417430)
AA seq 496 aa
MSGEEHSLSEAELSPGGSDDGHSLSPAHSGATGGRDSPLIGPSQQLTGLSGADGGGEDGG
LVPKSEVDMDRFPIGIREAVSQVLDGYDWTLVPMPVRVNNGNKSKPHVKRPMNAFMVWAQ
AARRKLADQYPHLHNAELSKTLGKLWRLLNESDKRPFIEEAERLRKQHKKDYPEYKYQPR
RRKNGKLGTNGEGGEGAEGDGSHAQSHYKALHLDVHSTGAGSPLADLHHHHHHHPAGQGH
SPPTPPTTPKTELQSGKMTEGKREGGGGSGSSRGGGLGVGAEGASGGHSSAGGKPHIDFC
TMDIGEISHDVMANIEPFDVNEFDQYLPPNGHPGVGQGGAATSSSSATSYAYALAAASGH
SAAWLSKQHQHQQPSPSASDATKAQIKSESGAGSHYAESSSSSSGTHVTYTPLSLPHYGS
AFPSLPSRAQFEYGEHQAPGPYYAHSSQAPGLYSAFSYMGPSQRPLYTTITDPSSVAQSH
SPTHWEQPVYTTLSRP
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgtctggagaggagcacagtctatccgaggcagagttgagtcccgggggctcagatgat
ggtcactctctgtcaccggcacactccggggccaccggcggccgggactccccgctcatc
ggtccgtcgcagcaactgacggggctttctggcgcagatggcggcggagaggacggtgga
ctagtacccaagtcagaggtggatatggaccggttccccatcggcatccgcgaggcggtc
agccaggtgctggacggatacgactggacgctcgtgcccatgcccgtgcgcgtaaacaac
gggaacaagagcaagccgcacgtgaagaggccgatgaacgccttcatggtgtgggcgcag
gccgcgcgccgtaaactggcggaccagtaccctcacctgcacaacgcggagctcagcaag
acactcggcaaactgtggaggctcctgaatgagagtgacaagaggcctttcattgaggag
gcggagcgactgcggaaacaacataagaaggactacccagagtacaagtaccagccccgc
agacgcaagaacggcaagctggggaccaatggtgagggaggggagggagcagagggggat
ggcagccacgcccagtcccattacaaggccctccacctggatgtgcacagtacaggggct
gggtcccccctggccgacctccaccaccatcatcaccaccaccctgcaggtcagggtcac
agcccgccaacaccccccaccaccccaaagacagagctccagtctggaaagatgacggag
gggaagagggagggcggaggtggctcaggatcctcccgtggaggaggcctgggggttgga
gcagagggggcctccgggggccattcatcagcgggcgggaaaccccacatcgacttctgc
accatggacatcggcgagatcagccacgacgtgatggccaacatcgagcccttcgacgtc
aacgagtttgaccagtacttgccgcccaacgggcacccaggggttggccagggcggcgcc
gccacatcaagctcctccgctacatcctacgcctacgccctcgctgctgccagcggccac
tcagccgcctggctctccaagcagcatcagcatcaacagccctccccctcagcctcagac
gccaccaaggcccagatcaagagtgagtccggggccgggagccactacgcagagtcttcc
tcctcttcgtcaggaacccacgtcacctacacccccctcagcctcccccactacggatca
gccttcccctcgctgccctccagggcccagtttgagtacggggagcaccaggctccgggg
ccgtactacgcccactccagccaggccccggggctgtactcagccttctcctacatgggg
cccagccagaggcccctttacactaccatcactgacccctccagcgtggcccagtctcac
agtcctacacattgggagcagccagtctacaccaccctgtcacggccatga

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