Oncorhynchus mykiss (rainbow trout): 110493478
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Entry
110493478 CDS
T07259
Name
(RefSeq) ras-related protein Rab-40C
KO
K07928
Ras-related protein Rab-40
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110493478
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
omy04031
]
110493478
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul5 complex
Target recognizing subunit
110493478
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
110493478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
Motif
Other DBs
NCBI-GeneID:
110493478
NCBI-ProteinID:
XP_021423449
Ensembl:
ENSOMYG00000013801
LinkDB
All DBs
Position
17:complement(23066103..23074400)
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AA seq
296 aa
AA seq
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MRGMMATQGSPVKSYDYLLKFLLVGDSDVGKGEILDSLQDGSAESPYPYSSGIDYKTTTI
LLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNGWSFDGIDRWIREIDEHA
PGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSRIVLM
RHGMEKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMNAVMM
HGRSYSVATNAAGGSGGVSGNNNSSSKGNSLKRSKSFKPPPSPPKSSSSKSNCNIT
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgggatgatggctacacagggcagccctgtcaagagttacgactacctcctgaag
ttcttgctggttggagacagtgatgtggggaaaggagagatcctagacagtctgcaggac
ggatcagcagagtctccctatccctacagcagtgggattgactacaagactaccacaatc
ctgttggatgggagaagagtcaagttagagttgtgggatacgtctggacagggtcgattc
tgcacaatcttccggtcatattcacgtggggcacagggaatcctgctagtttatgatatc
acaaatggctggtcgtttgatggcattgaccgctggatccgggagatcgatgagcatgcc
ccgggggtgccccgcatcctagttggcaaccggctccacctggcctttaagaggcaggtg
cccacggagcaggcccgcgcctacgccgagaagaacggcatgaccttctttgaggtcagc
cctctgtgcaacttcaacgtcatcgagtcgttcacggagctgtcgcgcatcgtgctgatg
aggcacggcatggagaagttctggagaccaaaccgagtgttcagcctccaggacctatgt
tgccgtgccatcgtctcatgcacccccgtccacctcattgacaagctgcctctccccgtg
gccatcaagtcccacctcaaatccttctccatggccaacggaatgaatgctgtcatgatg
catggacgctcctactccgtggccaccaatgcggcgggcggcagcggcggcgtgagcggc
aacaacaacagcagcagcaagggaaacagtctcaaacgctccaagtcctttaaaccgcct
ccgagcccccccaagagtagcagcagcaaaagtaactgtaacatcacctag
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